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A1-18-all-fractions_k255_3884341

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3884341_1

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1..234
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Mesorhizobium sp. WSM4349 RepID=UPI00037FF5B2
Uncharacterized protein {ECO:0000313|EMBL:KKK89079.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
A1-18-all-fractions_k255_3884341_2
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(320..889)
DNA (570bp) protein (190aa)
Transcriptional regulator n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P4L9_AZOS1
Transcriptional regulator, TetR family protein {ECO:0000313|EMBL:KFE64662.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyalangium minutum.;"
transcriptional regulator
A1-18-all-fractions_k255_3884341_3
bacterium YEK0313, Bacteria

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1068..1898
DNA (831bp) protein (277aa)
UPI0003CEA3F0 related cluster n=1 Tax=unknown RepID=UPI0003CEA3F0
HTH-type transcriptional regulator GadX {ECO:0000313|EMBL:CEJ11316.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
HTH-type transcriptional regulator gadX
A1-18-all-fractions_k255_3884341_4

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2476..3315
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000380C24F
Uncharacterized protein {ECO:0000313|EMBL:KKN03352.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
alpha/beta hydrolase fold family protein
A1-18-all-fractions_k255_3884341_5
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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3312..4229
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HTN6_PARL1
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
A1-18-all-fractions_k255_3884341_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5212..6684)
DNA (1473bp) protein (491aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
Two-component hybrid sensor and regulator n=1 Tax=Rhodovulum sp. PH10 RepID=J9A1S3_9RHOB
Signal transduction histidine kinase
A1-18-all-fractions_k255_3884341_7
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6704..8122)
DNA (1419bp) protein (473aa)
Pyridine nucleotide-disulfide oxidoreductase dimerization region n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HJH0_9RHIZ
Pyridine nucleotide-disulfide oxidoreductase dimerization region {ECO:0000313|EMBL:EHK59135.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
pyridine nucleotide-disulfide oxidoreductase dimerisation region
A1-18-all-fractions_k255_3884341_8
RBG_16_Alphaproteobacteria_64_48_curated, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(8418..9245)
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0003668870
uncharacterized membrane protein
Tax=RBG_16_Alphaproteobacteria_64_48_curated
A1-18-all-fractions_k255_3884341_9
Ochrobactrum sp. CDB2, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9529..9663
DNA (135bp) protein (45aa)
50S ribosomal protein L34 n=1 Tax=Ochrobactrum sp. CDB2 RepID=M3I1P9_9RHIZ
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=360313 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. CDB2.;"
rpmH; 50S ribosomal protein L34
A1-18-all-fractions_k255_3884341_10
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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9689..10012
DNA (324bp) protein (108aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
Ribonuclease P protein component n=1 Tax=Rhodovulum sp. PH10 RepID=J9DTE9_9RHOB
ribonuclease P protein component
A1-18-all-fractions_k255_3884341_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10009..11592
DNA (1584bp) protein (528aa)
Membrane protein insertase YidC n=1 Tax=Rhodovulum sp. PH10 RepID=J9DDS3_9RHOB
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
putative inner membrane protein translocase component YidC
Displaying 11 items

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