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A1-18-all-fractions_k255_4001587

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_4001587_1
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(122..1921)
DNA (1800bp) protein (600aa)
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I2Y1_9BRAD
Thiamine pyrophosphate-dependent enzyme, possible carboligase or decarboxylase {ECO:0000313|EMBL:EJN13586.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
acetolactate synthase large subunit
A1-18-all-fractions_k255_4001587_2
unknown

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comp(2125..2718)
DNA (594bp) protein (198aa)

This feature has no annotations

A1-18-all-fractions_k255_4001587_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3577..4566)
DNA (990bp) protein (330aa)
Extra-cytoplasmic solute receptor family protein n=1 Tax=Ralstonia sp. PBA RepID=I9W6C8_9RALS
bug; ABC transporter substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
A1-18-all-fractions_k255_4001587_4
Methylobacterium mesophilicum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5002..5463)
DNA (462bp) protein (154aa)
NUDIX hydrolase n=1 Tax=Methylobacterium mesophilicum SR1.6/6 RepID=M7Y1I3_9RHIZ
NUDIX hydrolase {ECO:0000313|EMBL:EMS40736.1}; TaxID=908290 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium mesophilicum SR1.6/6.;"
NUDIX hydrolase
A1-18-all-fractions_k255_4001587_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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5976..6140
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRN6_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE61111.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
A1-18-all-fractions_k255_4001587_6
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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6169..6768
DNA (600bp) protein (200aa)
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone n=1 Tax=Rhodovulum sp. PH10 RepID=J6LBE3_9RHOB
Cytochrome oxidase biogenesis protein Sco1/SenC/PrrC, putative copper metallochaperone {ECO:0000313|EMBL:EJW10653.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
copper-binding protein
A1-18-all-fractions_k255_4001587_7
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6916..7821
DNA (906bp) protein (302aa)
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I270_9BRAD
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJN12718.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
ABC transporter substrate-binding protein
A1-18-all-fractions_k255_4001587_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8026..8190
DNA (165bp) protein (55aa)
Flp/Fap pilin component n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZ65_RHOP2
Flp/Fap pilin component
Flp/Fap pilin component {ECO:0000313|EMBL:ABD06495.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
A1-18-all-fractions_k255_4001587_9
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8341..9984
DNA (1644bp) protein (548aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
lysK; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SAW6_9BRAD
A1-18-all-fractions_k255_4001587_10
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9995..10738
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSZ1_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC20914.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
A1-18-all-fractions_k255_4001587_11
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(10771..11322)
DNA (552bp) protein (184aa)
Uncharacterized protein n=2 Tax=Oligotropha carboxidovorans RepID=F8BI01_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07954.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
A1-18-all-fractions_k255_4001587_12
Microvirga aerilata, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11633..11977
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Nitratireductor indicus C115 RepID=K2PU19_9RHIZ
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:KFG67062.1}; TaxID=670292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga aerilata.;"
hypothetical protein
A1-18-all-fractions_k255_4001587_13
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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11974..13068
DNA (1095bp) protein (365aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
pyrD; dihydroorotate dehydrogenase 2 (EC:1.3.3.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S6S2_9BRAD
A1-18-all-fractions_k255_4001587_14
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13120..13413)
DNA (294bp) protein (98aa)
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IM24_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig181, whole genome shotgun sequence {ECO:0000313|EMBL:KIU46935.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
A1-18-all-fractions_k255_4001587_15
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13410..15179)
DNA (1770bp) protein (590aa)
ATP dependent DNA ligase n=1 Tax=Afipia sp. 1NLS2 RepID=D6V8I5_9BRAD
ATP dependent DNA ligase {ECO:0000313|EMBL:EFI50870.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
ATP-dependent DNA ligase
A1-18-all-fractions_k255_4001587_16
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15179..16216)
DNA (1038bp) protein (346aa)
Putative metallo-hydrolase/oxidoreductase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EA67_BRASB
putative mRNA 3-end processing factor
Putative metallo-hydrolase/oxidoreductase {ECO:0000313|EMBL:ABQ33061.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
A1-18-all-fractions_k255_4001587_17
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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16452..18995
DNA (2544bp) protein (848aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7F6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34308.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
lhr; large ATP-dependent helicase-related protein
A1-18-all-fractions_k255_4001587_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19022..19729
DNA (708bp) protein (236aa)
Metallophosphoesterase n=1 Tax=Rhodopseudomonas palustris (strain TIE-1) RepID=B3QEF4_RHOPT
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ACE99433.1}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
A1-18-all-fractions_k255_4001587_19
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19838..20623)
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P3R6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS34305.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
A1-18-all-fractions_k255_4001587_20
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20620..21546)
DNA (927bp) protein (309aa)
Permease n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H1R5_9BRAD
Permease {ECO:0000313|EMBL:ERF83682.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
permease membrane protein
A1-18-all-fractions_k255_4001587_21
unknown

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comp(21806..22456)
DNA (651bp) protein (217aa)

This feature has no annotations

A1-18-all-fractions_k255_4001587_22
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22661..23818
DNA (1158bp) protein (386aa)
Acyl-CoA dehydrogenase n=1 Tax=Nitratireductor indicus C115 RepID=K2NYW8_9RHIZ
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:ETR77216.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
acyl-CoA dehydrogenase
A1-18-all-fractions_k255_4001587_23
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23911..24375
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6LHC0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW12308.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
cupin
Displaying 23 items

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