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A1-18-all-fractions_k255_2716957_49

Organism: A1-18-all-fractions_metab_conc_44

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 46948..47484

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.2
  • Coverage: 178.0
  • Bit_score: 261
  • Evalue 4.50e-67
2'-5' RNA ligase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DFC1_BRAJP similarity UNIREF
DB: UNIREF100
  • Identity: 68.9
  • Coverage: 177.0
  • Bit_score: 254
  • Evalue 6.60e-65
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 68.9
  • Coverage: 177.0
  • Bit_score: 254
  • Evalue 1.90e-65

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Taxonomy

Afipia sp. P52-10 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 537
ATGCCGCGCCTCTTCACCGGTCTCGAAATTCCCTCCGACGTCGGTAAAGCGCTGGCCACGCTGCGCGGCGGCTTGCCGGGCGCACGCTGGATCGATCCCGATAATTATCACGTCACCTTGCGGTTCATCGGCGATGTTGATGATGTCGTCGCGCACGAGATCGCGTCGATGCTGGGACGCGTGCGCCGCCAGGCATTCGAATTGCGAATTGAAGATCTCAAATCGTTCGGAGGGCGCAAGCCTCGCCAGATCGTGGCGACGCTCGGACCGGCGCAGGCCCTGATGGAGCTTCAAGCCGAGCACGAGCGGCTCATGCAGCGGGTTGGGCTGGAGCCGGAAGGCCGCAAATATACCCCGCATGTTTCGCTGGCGCGGCTGCGCGAATCATCGAGTCGGCAGGTTGCCGACTATCTCGCAGTGCGCGCTCCCTTCCGCTCGCCGCCATTCGAGGTGTCGCGCTTCGTGTTGTTCTCGTCGCGGGCATCGATCGGCGGCGGCCCGTATGTGGTCGAAGCCGCCTACCCGCTCGCGGCCTGA
PROTEIN sequence
Length: 179
MPRLFTGLEIPSDVGKALATLRGGLPGARWIDPDNYHVTLRFIGDVDDVVAHEIASMLGRVRRQAFELRIEDLKSFGGRKPRQIVATLGPAQALMELQAEHERLMQRVGLEPEGRKYTPHVSLARLRESSSRQVADYLAVRAPFRSPPFEVSRFVLFSSRASIGGGPYVVEAAYPLAA*