ggKbase home page

A1-18-all-fractions_k255_1204827_20

Organism: A1-18-all-fractions_metab_conc_44

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(19162..22677)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 1175.0
  • Bit_score: 1730
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Rhodovulum sp. PH10 RepID=J5PM31_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 73.2
  • Coverage: 1175.0
  • Bit_score: 1730
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 70.9
  • Coverage: 1166.0
  • Bit_score: 1687
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodovulum sp. PH10 → Rhodovulum → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3516
ATGAGCGCCGCATCCAATCCCGTCGCGCTTCTCCACCCCGGCCGGCCGCTCACATTGGCGAGCGTCGCCGACGGCGCTGAAGGGCTCATCATTGCCGACATGGCCCGTGCCGTGGCTGCGCGGGGGCACGCTGCGGCAACGAGCCTCGTAGCCGTTTGCCGGGACGGCCCGCGTATGGCCGCGCTCGCCCGTGCGCTTCACTTTTTTGCGCCTGATCTCGCCGTACAGGAGTTTCCGGCGTGGGACTGTCTGCCCTATGACCGGGTTTCCCCGCATCCCGGCTTCCTTGCGCAGCGCATGACGGCGCTGTCTCGGCTGGCGCGCGCAAGGGATGGCGGCCGGCCCTCCGTTCTGCTCACCACGGTCAATGCCGCGCTTCAACGCGTGCCGGCACGCGACTTCGTTGCGCGCCAATGCCTGTCGGTTGCGCCCGGCCAAGTGCTCGCCATGGACGACATCACCCAATGGCTTGAGCTCAACGGCTTCATGCGCGCATCGACCGTGCGCGAGGCGGGCGACTATGCCGTGCGAGGAGGGATTATCGATCTTTACGCGCCGGGCATGGGGGAGCCGGTCCGGCTCGATTTTTTCGGCAACACGCTGGAGACCATCCGCAGTTTCGATCCGGAGAGCCAGCGCACCACGGATCAGTTGCGCGCGCTCGATCTCGTGCCGGTTGCCGAGTTCCAGCTGACGAGCGAAACGATCCGGCGCTTCCGCTTGGGTTACGTCGCGGCCTTCGGGGCGCCTGCGCCCGACGATGTGCTCTACCACGCCGTCAGCGAAGGCCGCCGCCAGGCCGGCATGGAGCATTGGCTGCCGCTGTTCCATGACCAGCTCGAGACGCTATTCGACTACGTGACGGCGTGCCCCGTGATGCTCGAGCCGCTGGCCGAGGACGCCGCGCGCGAGCGGCTGCGCCAAATCGAGGATTACTACGAGGCGCGCCGGCAAGCGCTCGCCCAGCGCGGTTCGGGCCCGCCATACCACCCGCTGCCGCCCGAGCGGCTTTATCTGAGCGAGGCCGAATGGAGCGCGCGGCTCGAGGCCGTCGCGCTCGCGCGACTGACCCCGTTCGCCGTGCCCGAAGGGCAGGGGTCTGCCATCGACGCGGGCACCAAGCAGGGGCGCAATTTCGCCGCCGAGCGCGCCGAGCCCGGCCGCAACGTGTTCGAAGCCGTGAGCCGGCACGTGGGGACAGTCAAGGCCGCCGGCAAGCGAGTCGTGATCGCGCTCTGGAGCGAAGGCGCGCGCGAGCGCATGGGCCACGTGCTGGCCGAGCACGCGCTTGCCGAGCTTGCCACGGTCAACTCATGGCCGCAGGCCCTCGCGCTGCCCCCCTCCCAGGTCGCGCTCGCGGTGCTGGGGCTCGAAAGCGGGTTCGAGAGCGCCGAGACGGCGGTCATCAGCGAGCAGGACATCCTCGGCGACCGGCTGGTCCGCCCGCGACGCGCCTCACGCCGGGCGGAAAACTTCATCGCGGAAGTGACGAGCCTTGCCGCCGGGGATCTCGTGGTCCACGTCGATCATGGCATCGGACGCTTCATCGGGCTGCGCGCGATCGAAGCCGCCGGCGCGCCGCACGATTGCCTGGAAATCCATTACGCCGGCGGCGACAAGCTGTTCCTGCCGGTCGAGAACGTCGAGCTTCTGTCCCGCTATGGCGCGGAAGAGACCCGGGTCGAGCTCGATCGGCTCGGTGGCGGCGCGTGGCAGGCGCGCAAAGCGCGCATGAAGCGTCGCATCCGCGACATCGCCGACAGCCTGATCAAGATCGCGGCCGAACGGCAGCTGCGGGAGGCGCCGCGTTTGACCGTGGAACCCGGACCCTACGACGAGTTCTGCGCGGGATTTCCCTATGAAGAGACCGAGGACCAGCAGGCCGTAATCGACGTGGTACTGGACGAACTCGCGTCCGGACGGCCGATGGACCGGCTGATCTGCGGCGACGTGGGGTTCGGCAAGACCGAGGTGGCGTTGCGGGCAGCCTTCGTCGCCGCCATGAACGGCAGACAGGTCGCGCTGGTGGTGCCTACGACACTCCTTGCCCGCCAACATGCGCACACCTTCACCGAGCGGTTTCGCGGATTTCCCGTTCACATCGCGCAAGCCTCGCGACTGGTCTCCACCGCGGAGCTGGCGCGGGTGAAGAAAGGAATTACCGACGGCAGCGTCGACATCGTCATCGGTACGCATGCGCTGCTCGGCAAGACGATCAAATTCCGCGACCTTGGCCTGCTCATCGTCGACGAGGAGCAGCATTTCGGCGTGGCCCATAAGGAAAGGCTCAAACAGCTGCGCGCCGAGGTGCATGTGATCACGCTGACCGCGACGCCGATCCCGCGCACGTTGCAACTCGCGCTGTCTGGCGTGCGGGATCTGTCGATCATCGCCTCGCCGCCAGTCGATCGGCTTGCCGTGCGCACCTTTGTTGCGCCGTTTGACCCCGTCATCGTGCGTGAGGCATTGTTGCGCGAGCGCTACCGTGGCGGGCAATCCTTCTATGTCTGTCCGCGCATCGAGGATCTCGCCGGCGCCAAGGATTTTCTCGACAAGCACGTGCCCGAAGTGCGGGTCGCGGTTGCGCATGGGCAGATGCCCGCGGCCGTGCTCGAAGACATCATGTCCGCCTTCTACGACGGCAAGTACGACCTGCTGCTGTCGACCACGATCATCGAATCCGGCCTCGACATTCCGACTGCCAACACGCTCATCGTGCATCGCGCGGATCGTTTCGGGTTATCCCAACTCTATCAGCTGCGCGGGCGAGTGGGCCGTTCCAAGCTGCGCGCCTATTCCTTGTTCACGCTGCCGGCCGCGGGCAAAATCACGCCGCAGGCCGAACGCCGGCTCAAGGTGTTGCAATCACTCGACACGCTCGGTGCCGGATTCCAACTCGCCTCTCACGATCTCGACATTCGCGGCGCCGGCAATCTCCTGGGGGAGGAGCAGTCCGGACACATCAAGGAGGTCGGCTTCGAGCTCTATCAGCAAATGCTGGAAGAGGCGGTGACGAGCCTGAAAGCCGGCATCAGCGCGCCGGTCGCCGATAAGTGGTCGCCGCAGATCACCGTCGGAACGCCGGTGATGATCCCCGAGGATTACGTCGCCGACCTGCCGGTGCGCCTTGCGCTGTACCGACGGCTCGCCGAAATCGAGGACGAGCGGGAGATCGAGGCGTTTGGCGCCGAGCTCGTCGACCGTTTTGGGCCGCTGCCGGTGGAGGTCGAGCATCTCCTCCAGATCGTCGCGATTAAATCGCTATGTCGGCAGGCCAACGTGGAAAAGATCGAGACCGGCCCGAAGGGTGCGGTGGTGTCGTTCCGCGACAACACCTTCGCCAATCCCGATCGGCTCGTCGCGTTCATCCGCGATCTCGGCCCGGCCGCGCGCGTGCGGCCGGACATGAAGGTCGTCTTCTTCGACGATTGGGAAAATCCCGACGCGCGCCTGCGGGGAACCGCGGCCATTCTGCGCAATCTGGTGACGCTCGCACAACCGGCCAAGGCCGCGTGA
PROTEIN sequence
Length: 1172
MSAASNPVALLHPGRPLTLASVADGAEGLIIADMARAVAARGHAAATSLVAVCRDGPRMAALARALHFFAPDLAVQEFPAWDCLPYDRVSPHPGFLAQRMTALSRLARARDGGRPSVLLTTVNAALQRVPARDFVARQCLSVAPGQVLAMDDITQWLELNGFMRASTVREAGDYAVRGGIIDLYAPGMGEPVRLDFFGNTLETIRSFDPESQRTTDQLRALDLVPVAEFQLTSETIRRFRLGYVAAFGAPAPDDVLYHAVSEGRRQAGMEHWLPLFHDQLETLFDYVTACPVMLEPLAEDAARERLRQIEDYYEARRQALAQRGSGPPYHPLPPERLYLSEAEWSARLEAVALARLTPFAVPEGQGSAIDAGTKQGRNFAAERAEPGRNVFEAVSRHVGTVKAAGKRVVIALWSEGARERMGHVLAEHALAELATVNSWPQALALPPSQVALAVLGLESGFESAETAVISEQDILGDRLVRPRRASRRAENFIAEVTSLAAGDLVVHVDHGIGRFIGLRAIEAAGAPHDCLEIHYAGGDKLFLPVENVELLSRYGAEETRVELDRLGGGAWQARKARMKRRIRDIADSLIKIAAERQLREAPRLTVEPGPYDEFCAGFPYEETEDQQAVIDVVLDELASGRPMDRLICGDVGFGKTEVALRAAFVAAMNGRQVALVVPTTLLARQHAHTFTERFRGFPVHIAQASRLVSTAELARVKKGITDGSVDIVIGTHALLGKTIKFRDLGLLIVDEEQHFGVAHKERLKQLRAEVHVITLTATPIPRTLQLALSGVRDLSIIASPPVDRLAVRTFVAPFDPVIVREALLRERYRGGQSFYVCPRIEDLAGAKDFLDKHVPEVRVAVAHGQMPAAVLEDIMSAFYDGKYDLLLSTTIIESGLDIPTANTLIVHRADRFGLSQLYQLRGRVGRSKLRAYSLFTLPAAGKITPQAERRLKVLQSLDTLGAGFQLASHDLDIRGAGNLLGEEQSGHIKEVGFELYQQMLEEAVTSLKAGISAPVADKWSPQITVGTPVMIPEDYVADLPVRLALYRRLAEIEDEREIEAFGAELVDRFGPLPVEVEHLLQIVAIKSLCRQANVEKIETGPKGAVVSFRDNTFANPDRLVAFIRDLGPAARVRPDMKVVFFDDWENPDARLRGTAAILRNLVTLAQPAKAA*