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A1-18-all-fractions_k255_3096942_10

Organism: A1-18-all-fractions_metab_conc_44

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: 6875..11002

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 1373.0
  • Bit_score: 2495
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; TaxID=224911 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC; 14792 / USDA 110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 1373.0
  • Bit_score: 2495
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=66 Tax=Bradyrhizobium RepID=RPOB_BRADU similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 1373.0
  • Bit_score: 2495
  • Evalue 0.0

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Taxonomy

Bradyrhizobium diazoefficiens → Bradyrhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4128
ATGGCGCAGACGTTTACCGGTCGCAAGCGCGTTCGCAAGTTTTTCGGGAAAATCCAGGAAGTCGCAGAGATGCCGAACCTCATCGAGGTTCAAAAGGCGTCTTACGACCAGTTCCTGCTGGTGCGGGAGCCGGTCGGCGGCCGGCCCGACGAGGGGCTGCAGGCCGTATTCAAGTCGGTGTTCCCGATCTCGGATTTTTCCAACACGTCGATGCTCGAATTCGTCAAGTACGAATTCGAGGCTCCGAAATACGACGTCGACGAGTGCCGCCAGCGCGGCATGACCTACGCCGCGCCGCTCAAAGTGACGCTGCGCCTCATCGTGTTCGATATCGATGAGGAGACGGGCGCCAAGTCGGTCAAAGACATCAAGGAGCAGGATGTCTACATGGGCGACATCCCGCTCATGACCAACAACGGCACCTTCGTCGTCAACGGGACCGAGCGGGTGATCGTGTCGCAGATGCATCGCTCGCCCGGCGTGTTCTTCGACCACGACAAAGGCAAGACCCATTCATCGGGCAAACTTCTGTTCGCCGCCCGGATCATTCCCTATCGCGGCTCCTGGCTCGACATCGAGTTCGATGCCAAGGACATCGTCTATGCACGCATTGACCGGCGCCGGAAGATCCCGGTGACGTCGCTGCTGTATGCGCTCGGCATGGACGCCGAGGAAATCCTCAACACCTTCTACCGCAAGGTGAGCTACAAGCGGCAGAAGGACGGCTGGCGCGTGCCGTTCGATGCCAACCGTTTCCGCGGCTACAAGGCGATCAACGATCTGGTCGACGCCGATTCCGGCAGAGTGGTGTTGGAGGCCGGCAAGAAGCTCACCGTGCGCCAGGCGCGCCAACTCGGCGAGAAGGGGCTCAAGGCGCTGCGCATGACCGACCAGGAGCTGGTCGGCCATTACGTCGCGGAAGATCTCGTGAACCCGAAGACGGGCGAGATTCACGCGGAGGCGGGCGAAGAAATCACCGAGAAAAATCTCAAGGCATTGAACGAAGCTGGCTACAAGGAGCTGCCGCTCCTCGACATCGATCACGTCAATGTCGGCGCCTATATCCGCAATACTCTGAGCGTCGACAAGAACATGACGCGCGAGGACGCGCTGTTCGACATCTATCGCGTCATGCGTCCAGGCGAGCCGCCGACGCTCGATACCGCGCAAAACATGTTCCAGTCGCTGTTCTTCGACGCCGAGCGCTACGATCTCTCGGCGGTAGGCCGCGTCAAGATGAACATGCGGCTCGACCTTGATGCTCCCGACAGCATGCGCGTGCTGCGCAAGGAAGACATCATCGCGGTGATCCGCACCTTGGTCGATCTGCGGGACGGCAAAGGCGAAATCGACGACATCGATCACCTCGGCAATCGCCGGGTGCGCTCGGTCGGCGAACTGATGGAGAACCAGTATCGCATCGGGCTCTTGCGCATGGAGCGGGCGATCAAGGAGCGCATGTCATCGGTCGATATCGACACGGTGATGCCGCAGGACCTCATCAACGCCAAGCCGGCAGCGGCGGCGGTGCGCGAGTTTTTCGGCTCCTCGCAGCTCAGCCAATTCATGGATCAGACCAACCCGCTGTCCGAGATCACGCACAAGCGGCGGCTGTCGGCGCTCGGGCCGGGCGGCCTCACGCGCGAGCGTGCCGGGTTCGAGGTGCGCGACGTGCACCCCACCCATTACGGCCGCATCTGCCCGATCGAGACGCCGGAGGGCCCGAATATCGGCCTGATCAACTCGCTCGCCACGTATGCGCGGGTGAACAAGTACGGCTTCGTCGAGACCCCGTATCGCAAGGTCAAGGATGGCCGCGTCACCGACGAAGTGGTCTATCTCTCGGCGATGGAGGAAGGCCGTTATACGGTCGCGCAGGCGAACGCCTCGGTCGACAACCGCGGGCGCTTCACCGAGGACCTGATCGTATGCCGCCATGCCGGCGACGTGCAGATGGTGCCGGCCGACAAGGTCGACTTCATGGACGTGTCGCCGAAGCAACTCGTCTCGGTGGCAGCGGCGTTGATTCCGTTCCTTGAAAACGACGACGCCAACCGCGCCTTGATGGGCTCCAACATGCAGCGCCAGGCGGTACCGCTCCTGCGCGCCGAGGCGCCGTTCGTCGGCACCGGCATGGAGGGCGTGGTGGCGCGCGATTCCGGCGCCTCGATCGCGGCGCGCCGCACCGGCGTCGTCGATCAGGTCGACGCCACTCGCATCGTGGTGCGCGCGACCGAGGAGTCCGATCCGACCAAACCGGGCGTCGACATCTATCGCCTGATGAAATTCCAGCGCTCGAACCAGAACACCTGCATCAATCAGCGTCCGCTGGTGAAGATGGGCGATCAGGTCACGAAGGGCGACATTATCGCGGACGGTCCGTCGACCGAGCTCGGCGAGCTCGCGCTCGGCCGCAACGTGCTGGTCGCCTTCATGCCGTGGAATGGCTACAACTTCGAGGACTCCATCCTGCTGTCGGAGCGCATCGTCAAGGACGACGTCTTCTCCTCGATCCATATCGAGGAATTCGAGGTGATGGCGCGCGACACCAAGCTCGGCCCGGAGGAAATCACCCGCGACATCCCGAACGTCTCGGAAGAGGCGCTCAAGAACCTCGATGAGGCCGGCATCGTCTACATCGGGGCCGAGGTTCGCGCCGGCGACATTCTCTGCGGCAAGATCACGCCGAAGGGCGAAAGCCCGATGACGCCGGAGGAAAAGCTCCTGCGCGCGATCTTCGGCGAGAAGGCTTCCGACGTGCGCGACACGTCGTTGCGCGTCCCGCCTGGGGTCCAGGGGACGGTGGTCGAGGTGCGCGTGTTCAACCGTCACGGCGTCGAGAAGGACGAACGTGCGCTCGCCATCGAGCGTGAAGAGATCGAACGGCTGGCCAAGGACCGCGACGACGAGCAGGCGATCCTCGACCGCAACGTGTACGGCCGCTTGGCGGAGATGCTTGAAGGCCGCCAAGGCATCGCTGGACCGAAGGGTTTCAAGAAGGATTCGAAGATCACCCGTGCGGTGCTCGAAGAATATCCGCGCTCGCAATGGTGGCAGTTCGCCTCGCCGAACGACAAGCTGATGGCCGAGATCGAGGCGATCCGCAAGCAGTACGACGAGTCGAAGAAAGGGCTCGAGCAGCGCTTCCTCGACAAGGTCGAGAAGCTGCAGCGTGGCGACGAGCTTCCACCGGGCGTGATGAAGATGGTCAAGGTCTTCGTCGCGGTGAAGCGCAAGATCCAGCCGGGCGACAAGATGGCCGGGCGCCACGGCAACAAGGGCGTGGTGTCGAAGATCGTGCCGATCGAGGACATGCCGTTCCTCGAAGACGGCACGCAGGTCGACATCGTGCTCAATCCGTTGGGTGTGCCCAGCCGGATGAACGTGGGGCAAATCCTGGAGACCCATCTCGGCTGGGCCTGCGCCGGACTCGGGTCGAGGATTGGGCAGGCAATCGATGCCTACTACGGCAAACGCGATACCCGTCCGCTCAAGGAGACGCTCAAGAAGATCTACGGTGACGACGAGACGATCAAGTCGCTGGGCGAGCCCGAGCTGGTCGAACTCGGAAACAATTTGCGTCACGGGGTGCCGATCGCAACACCCGTCTTCGACGGCGCCAAGGAGGCCGACATCGAGAAGATGCTCGACCTCGCCGGGCTCGATCATTCGGGCCAAGTGACGCTCTATGACGGGCGAACCGGCGAGCCGTTCGATCGCGAGGTGACGGTCGGTTACATCTACATGATGAAGCTGCATCACCTCGTCGACGACAAGATTCACGCGCGCTCGATCGGCCCCTACAGCCTCGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGGTTCGGCGAAATGGAGGTGTGGGCGCTCGAAGCCTACGGCGCCGCCTACACACTGCAAGAGATGCTGACCGTCAAATCGGACGACGTCGCCGGCCGCACCAAGGTCTATGAAGCGATCGTGCGCGGCGACGACACGTTCGAGGCCGGTATTCCGGAATCCTTCAACGTGCTGGTCAAGGAGATGCGTTCGCTCGGCCTCAACGTCGATCTGCACAATTCGAAGCAGCAACGGCAAGGGCCCGGCGGCGAAATCGCGGAAGCCGCGGAATAG
PROTEIN sequence
Length: 1376
MAQTFTGRKRVRKFFGKIQEVAEMPNLIEVQKASYDQFLLVREPVGGRPDEGLQAVFKSVFPISDFSNTSMLEFVKYEFEAPKYDVDECRQRGMTYAAPLKVTLRLIVFDIDEETGAKSVKDIKEQDVYMGDIPLMTNNGTFVVNGTERVIVSQMHRSPGVFFDHDKGKTHSSGKLLFAARIIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLLYALGMDAEEILNTFYRKVSYKRQKDGWRVPFDANRFRGYKAINDLVDADSGRVVLEAGKKLTVRQARQLGEKGLKALRMTDQELVGHYVAEDLVNPKTGEIHAEAGEEITEKNLKALNEAGYKELPLLDIDHVNVGAYIRNTLSVDKNMTREDALFDIYRVMRPGEPPTLDTAQNMFQSLFFDAERYDLSAVGRVKMNMRLDLDAPDSMRVLRKEDIIAVIRTLVDLRDGKGEIDDIDHLGNRRVRSVGELMENQYRIGLLRMERAIKERMSSVDIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATYARVNKYGFVETPYRKVKDGRVTDEVVYLSAMEEGRYTVAQANASVDNRGRFTEDLIVCRHAGDVQMVPADKVDFMDVSPKQLVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMEGVVARDSGASIAARRTGVVDQVDATRIVVRATEESDPTKPGVDIYRLMKFQRSNQNTCINQRPLVKMGDQVTKGDIIADGPSTELGELALGRNVLVAFMPWNGYNFEDSILLSERIVKDDVFSSIHIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVRAGDILCGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRVPPGVQGTVVEVRVFNRHGVEKDERALAIEREEIERLAKDRDDEQAILDRNVYGRLAEMLEGRQGIAGPKGFKKDSKITRAVLEEYPRSQWWQFASPNDKLMAEIEAIRKQYDESKKGLEQRFLDKVEKLQRGDELPPGVMKMVKVFVAVKRKIQPGDKMAGRHGNKGVVSKIVPIEDMPFLEDGTQVDIVLNPLGVPSRMNVGQILETHLGWACAGLGSRIGQAIDAYYGKRDTRPLKETLKKIYGDDETIKSLGEPELVELGNNLRHGVPIATPVFDGAKEADIEKMLDLAGLDHSGQVTLYDGRTGEPFDREVTVGYIYMMKLHHLVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVAGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLNVDLHNSKQQRQGPGGEIAEAAE*