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A1-18-all-fractions_k255_3293138_6

Organism: A1-18-all-fractions_metab_conc_44

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 11 / 38
Location: comp(4329..4952)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor, possible FecI n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N8T4_RHOPA similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 185.0
  • Bit_score: 210
  • Evalue 9.80e-52
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 57.3
  • Coverage: 185.0
  • Bit_score: 210
  • Evalue 2.80e-52
RNA polymerase ECF-type sigma factor, possible FecI {ECO:0000313|EMBL:CAE27260.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 185.0
  • Bit_score: 210
  • Evalue 1.40e-51

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Taxonomy

Rhodopseudomonas palustris → Rhodopseudomonas → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 624
ATGACGACGGCCTGCTCCCGCACGGAGTGGCCCGCCGCTTCGCCAAGACGGGCAGCGGCGGCCGAGGCTCTCTCGGATGACGTGTTGATCAGACGGATCGCCAATGCCGATCAGCGTGCCATGCGCATGCTGTTTGCGCGGCATCGGATCGCGATCTATCGCTGGCTCGTTCGCCTTGTGGGCGACGAGGGCTTGGCCGAGGACCTCTTGAGCGAGGTGTTTTTCGACGTTTGGCGCAAGGCTCGCTCGTTCGAAGGCCGCTCTTCGGTTTCGACCTGGCTGTTGGCCATCGCGCGGCACAAGGCGCTGTCGGCGCGCCGCCGAACGCAGGTCGAGCGGGCAATCGAGCTGGATGACGAGCTTGCGTGGACCATGGCGGATCCCGCCGACAATCCCGAGCTTGTTCTCGAGAAGAAAGACCGCGAAAAGCTGCTGCGGCGTTCCTTGGCTCGGCTCTCGCCGGAGCACGGCGAAGTGATCGACCTCACCTATTACCATGGCAAAACGATCAAGGAGATTGCCGAGATCGTCGGCATCAACGAAGCGACAGTGAAGTCGCGGACGTTCTACGCGCGCAAGCGGCTCGCGCAGCTGGTCAGCGCGGCGGCGCCCGCCAGCCACTAA
PROTEIN sequence
Length: 208
MTTACSRTEWPAASPRRAAAAEALSDDVLIRRIANADQRAMRMLFARHRIAIYRWLVRLVGDEGLAEDLLSEVFFDVWRKARSFEGRSSVSTWLLAIARHKALSARRRTQVERAIELDDELAWTMADPADNPELVLEKKDREKLLRRSLARLSPEHGEVIDLTYYHGKTIKEIAEIVGINEATVKSRTFYARKRLAQLVSAAAPASH*