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A1-18-all-fractions_k255_3293138

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_3293138_1
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..982
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Methylocystis rosea RepID=UPI00037AB502
Uncharacterized protein {ECO:0000313|EMBL:ESW94213.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
integrase family protein
A1-18-all-fractions_k255_3293138_2
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1618..2004)
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036423FE
Putative uncharacterized protein {ECO:0000313|EMBL:EHR04926.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
A1-18-all-fractions_k255_3293138_3
unknown

Not on your lists

comp(2141..2407)
DNA (267bp) protein (89aa)

This feature has no annotations

A1-18-all-fractions_k255_3293138_4
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2646..3470)
DNA (825bp) protein (275aa)
Nitroreductase n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RSV0_9RHOB
Nitroreductase {ECO:0000313|EMBL:EPX81115.1}; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;" source="Litoreibacter arenae DSM 19593.;"
nitroreductase
A1-18-all-fractions_k255_3293138_5
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3629..4327
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJV1_NITHX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE63496.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
A1-18-all-fractions_k255_3293138_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4329..4952)
DNA (624bp) protein (208aa)
RNA polymerase ECF-type sigma factor, possible FecI n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N8T4_RHOPA
RNA polymerase sigma factor
RNA polymerase ECF-type sigma factor, possible FecI {ECO:0000313|EMBL:CAE27260.1}; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;"
A1-18-all-fractions_k255_3293138_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5349..6329
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PEN6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS36808.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein
A1-18-all-fractions_k255_3293138_8
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6362..8086
DNA (1725bp) protein (575aa)
dehydratase (EC:4.2.1.-)
Dehydratase family protein 4 {ECO:0000313|EMBL:ADP16300.1}; EC=4.2.1.- {ECO:0000313|EMBL:ADP16300.1};; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
dihydroxy-acid dehydratase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002ED6B41
A1-18-all-fractions_k255_3293138_9
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8115..9158
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Nevskia ramosa RepID=UPI0003B79E48
Luciferase-like protein {ECO:0000313|EMBL:EIK88998.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
luciferase-like protein
A1-18-all-fractions_k255_3293138_10
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9258..10208
DNA (951bp) protein (317aa)
Extradiol dioxygenase n=1 Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WH56_9NOCA
glyoxalase-like domain protein
Glyoxalase-like domain protein {ECO:0000313|EMBL:AJZ58939.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
A1-18-all-fractions_k255_3293138_11
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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10274..11188
DNA (915bp) protein (305aa)
Beta-lactamase protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6IYP1_9RHOB
Beta-lactamase protein {ECO:0000313|EMBL:EJW10200.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
metallo-beta-lactamase superfamily protein
A1-18-all-fractions_k255_3293138_12
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11217..12071)
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UAS1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ETR76525.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein
A1-18-all-fractions_k255_3293138_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(12254..13888)
DNA (1635bp) protein (545aa)
putative acyl-CoA synthetase (EC:2.3.1.86)
AMP-dependent synthetase and ligase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07IF8_RHOP5
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABJ08276.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
A1-18-all-fractions_k255_3293138_14
RBG_19FT_COMBO_Armatimonadetes_69_19_curated, Armatimonadetes, Bacteria

Not on your lists

comp(14006..15139)
DNA (1134bp) protein (378aa)
solA; N-methyltryptophan oxidase; K00301 sarcosine oxidase [EC:1.5.3.1] id=24469920 bin=RBG_19FT_COMBO_GAL15_69_19 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
solA; N-methyltryptophan oxidase (EC:1.5.3.1)
Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated
A1-18-all-fractions_k255_3293138_15
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15316..16086
DNA (771bp) protein (257aa)
Extensin-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQ56_NITHX
extensin-like
Extensin-like protein {ECO:0000313|EMBL:ABE61641.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
A1-18-all-fractions_k255_3293138_16
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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16213..17601
DNA (1389bp) protein (463aa)
Omega-amino acid--pyruvate aminotransferase n=1 Tax=Rhodovulum sp. PH10 RepID=J5PES0_9RHOB
Omega-amino acid--pyruvate aminotransferase {ECO:0000313|EMBL:EJW10202.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
class III aminotransferase
A1-18-all-fractions_k255_3293138_17
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17664..18314)
DNA (651bp) protein (217aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Rhodovulum sp. PH10 RepID=J5PMI7_9RHOB
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EJW11757.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
A1-18-all-fractions_k255_3293138_18
unknown

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18842..19033
DNA (192bp) protein (64aa)

This feature has no annotations

A1-18-all-fractions_k255_3293138_19
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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19232..20209
DNA (978bp) protein (326aa)
Magnesium and cobalt transporter CorA n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H2B4_9BRAD
Magnesium transporter {ECO:0000313|EMBL:KJC60708.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
magnesium transporter
A1-18-all-fractions_k255_3293138_20
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20261..21016)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIE7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41286.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
short-chain dehydrogenase/reductase SDR
A1-18-all-fractions_k255_3293138_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21117..21758)
DNA (642bp) protein (214aa)
pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000255|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000255|HAMAP-Rule:MF_01629}; Short=PNPOx {ECO:0000255|HAMAP-Rule:MF_01629};; Pyridoxal 5'-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_01629}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Pyridoxine/pyridoxamine 5'-phosphate oxidase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=PDXH_NITHX
A1-18-all-fractions_k255_3293138_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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21844..22281
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21A85_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD86701.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
A1-18-all-fractions_k255_3293138_23
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22513..23484
DNA (972bp) protein (324aa)
DnaJ-class molecular chaperone CbpA n=1 Tax=Rhodovulum sp. PH10 RepID=J5PMH4_9RHOB
DnaJ-class molecular chaperone CbpA {ECO:0000313|EMBL:EJW11747.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
molecular chaperone DnaJ
A1-18-all-fractions_k255_3293138_24
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23505..24287)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D6X4_BRAJP
anti-sigma factor
Anti-sigma factor {ECO:0000313|EMBL:KGT80427.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
A1-18-all-fractions_k255_3293138_25
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24304..24795)
DNA (492bp) protein (164aa)
RNA polymerase sigma factor n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IJE5_9BRAD
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
ECF family RNA polymerase sigma factor
A1-18-all-fractions_k255_3293138_26
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25021..25839
DNA (819bp) protein (273aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;"
Enoyl-[acyl-carrier-protein] reductase [NADH] n=2 Tax=Rhodopseudomonas palustris RepID=B3QIK8_RHOPT
enoyl-ACP reductase
A1-18-all-fractions_k255_3293138_27
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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25836..26495
DNA (660bp) protein (220aa)
phosphoglycerate kinase n=1 Tax=Bradyrhizobium japonicum RepID=UPI00037C0B0B
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ABE61650.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
A1-18-all-fractions_k255_3293138_28
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26628..27746
DNA (1119bp) protein (373aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
chorismate synthase (EC:4.2.3.5)
chorismate synthase n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031C2045
A1-18-all-fractions_k255_3293138_29
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27763..28872
DNA (1110bp) protein (370aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00180}; Short=DHBP synthase {ECO:0000256|HAMAP-Rule:MF_00180};; EC=4.1.99.12 {ECO:0000256|HAMAP-Rule:MF_00180};; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Rhodovulum sp. PH10 RepID=J6IY13_9RHOB
3,4-dihydroxy-2-butanone 4-phosphate synthase
A1-18-all-fractions_k255_3293138_30
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28936..29769
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TSX9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCE09567.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein
Displaying items 1-30 of 43 in total

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