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A1-18-all-fractions_k255_82154

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A1-18-all-fractions_k255_82154_1
unknown

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comp(2..121)
DNA (120bp) protein (40aa)

This feature has no annotations

A1-18-all-fractions_k255_82154_2
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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227..553
DNA (327bp) protein (109aa)
cytochrome c oxidase, cbb3-type subunit I (EC:1.9.3.1)
Cytochrome c oxidase, cbb3-type, subunit I {ECO:0000313|EMBL:ADX45484.1}; EC=1.9.3.1 {ECO:0000313|EMBL:ADX45484.1};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
Cytochrome c oxidase, cbb3-type, subunit I n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q3V6_ACIAP
A1-18-all-fractions_k255_82154_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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569..1201
DNA (633bp) protein (211aa)
ccoO; Cbb3-type cytochrome oxidase subunit 2 CcoO (EC:1.9.3.1)
Cbb3-type cytochrome oxidase subunit 2 CcoO {ECO:0000313|EMBL:BAL96531.1}; EC=1.9.3.1 {ECO:0000313|EMBL:BAL96531.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
peptidase S41 n=1 Tax=Curvibacter lanceolatus RepID=UPI000367891E
A1-18-all-fractions_k255_82154_4
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1215..1364
DNA (150bp) protein (50aa)
Cbb3-type cytochrome oxidase component n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MNW1_9BURK
cbb3-type cytochrome oxidase subunit
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
A1-18-all-fractions_k255_82154_5
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1471..2391
DNA (921bp) protein (307aa)
Cbb3-type cytochrome c oxidase subunit n=2 Tax=Comamonas testosteroni RepID=D0J669_COMT2
cytochrome c oxidase, cbb3-type, subunit III
Cbb3-type cytochrome c oxidase subunit {ECO:0000256|PIRNR:PIRNR000006}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
A1-18-all-fractions_k255_82154_6
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2407..3858
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000380D8C7
Cytochrome c oxidase accessory protein CcoG {ECO:0000313|EMBL:KDB51157.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
cytochrome c oxidase accessory protein CcoG
A1-18-all-fractions_k255_82154_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3872..4126
DNA (255bp) protein (85aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRY7_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR72305.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A1-18-all-fractions_k255_82154_8
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4157..4426
DNA (270bp) protein (90aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRY6_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
A1-18-all-fractions_k255_82154_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4504..5925
DNA (1422bp) protein (474aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=28068 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (Rhodocyclus gelatinosus) (Rhodopseudomonas; gelatinosa).;"
hemN; oxygen-independent coproporphyrinogen III oxidase HemN (EC:1.3.99.22)
Coproporphyrinogen-III oxidase n=1 Tax=Rubrivivax gelatinosus RepID=Q5GCA1_RUBGE
A1-18-all-fractions_k255_82154_10
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5925..6602
DNA (678bp) protein (226aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034AD25E
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A1-18-all-fractions_k255_82154_11
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6753..7859
DNA (1107bp) protein (369aa)
Putative fatty acid desaturase n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SLW0_METPP
fatty acid desaturase
Putative fatty acid desaturase {ECO:0000313|EMBL:ABM96549.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A1-18-all-fractions_k255_82154_12
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7844..8452
DNA (609bp) protein (203aa)
Hemerythrin HHE cation binding protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q222D6_RHOFD
Uncharacterized protein {ECO:0000313|EMBL:KDB51663.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
hemerythrin HHE cation-binding protein
A1-18-all-fractions_k255_82154_13
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria

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8543..9415
DNA (873bp) protein (291aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00037FF60D
universal stress protein UspA
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
A1-18-all-fractions_k255_82154_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9623..10378
DNA (756bp) protein (252aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1A0_VARPS
two component transcriptional regulator, winged helix family
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACS22171.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A1-18-all-fractions_k255_82154_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10401..12506
DNA (2106bp) protein (702aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1A1_VARPS
multi-sensor hybrid histidine kinase
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ACS22172.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A1-18-all-fractions_k255_82154_16
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12557..13372)
DNA (816bp) protein (272aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D196_VARPS
transcriptional regulator, Crp/Fnr family
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACS22167.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A1-18-all-fractions_k255_82154_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13622..14122
DNA (501bp) protein (167aa)
Aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D197_VARPS
aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain protein
Aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain protein {ECO:0000313|EMBL:ACS22168.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A1-18-all-fractions_k255_82154_18
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14232..15116)
DNA (885bp) protein (295aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Polaromonas sp. CF318 RepID=J2LSZ4_9BURK
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:EJL88483.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
beta-lactamase-like protein
A1-18-all-fractions_k255_82154_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15203..15517
DNA (315bp) protein (105aa)
ArsR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI000362AE92
Putative transcriptional regulator {ECO:0000313|EMBL:EJL78991.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
ArsR family transcriptional regulator
A1-18-all-fractions_k255_82154_20
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15521..15955
DNA (435bp) protein (145aa)
YeeE/YedE family protein n=1 Tax=Variovorax paradoxus RepID=UPI0003620F09
hypothetical protein
YeeE/YedE {ECO:0000313|EMBL:KIF79960.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
A1-18-all-fractions_k255_82154_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15965..16399
DNA (435bp) protein (145aa)
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003631B0B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS22161.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A1-18-all-fractions_k255_82154_22
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16403..17053
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121R8_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE46724.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
A1-18-all-fractions_k255_82154_23
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17105..17608)
DNA (504bp) protein (168aa)
Thiol-disulfide isomerase-like thioredoxin n=1 Tax=Polaromonas sp. CF318 RepID=J3DFK9_9BURK
Thiol-disulfide isomerase-like thioredoxin {ECO:0000313|EMBL:EJL90941.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
redoxin domain-containing protein
A1-18-all-fractions_k255_82154_24
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17676..17948)
DNA (273bp) protein (91aa)
signal peptide protein n=1 Tax=Rhodocyclaceae RepID=UPI00036E634A
Putative signal peptide protein {ECO:0000313|EMBL:EGF33080.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
transmembrane protein
A1-18-all-fractions_k255_82154_25
unknown

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comp(18142..18399)
DNA (258bp) protein (86aa)

This feature has no annotations

Displaying 25 items

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