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A2-16-all-fractions_k255_3146401

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Displaying items 1-30 of 36 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A2-16-all-fractions_k255_3146401_1
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..1015)
DNA (1014bp) protein (338aa)
poly(R)-hydroxyalkanoic acid synthase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002EA0A0A
Putative poly(R)-hydroxyalkanoic acid synthase {ECO:0000313|EMBL:GAO39798.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
polyhydroxyalkanoate synthase
A2-16-all-fractions_k255_3146401_2
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1071..2282
DNA (1212bp) protein (404aa)
Putative hydrolase n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WFV6_9GAMM
Putative hydrolase {ECO:0000313|EMBL:GAO40007.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
beta-lactamase
A2-16-all-fractions_k255_3146401_3
unknown

Not on your lists

comp(2284..2661)
DNA (378bp) protein (126aa)

This feature has no annotations

A2-16-all-fractions_k255_3146401_4
unknown

Not on your lists

2800..3366
DNA (567bp) protein (189aa)

This feature has no annotations

A2-16-all-fractions_k255_3146401_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3373..3594
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BKA5_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI07216.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
A2-16-all-fractions_k255_3146401_6
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3610..3792
DNA (183bp) protein (61aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036C4E40
Uncharacterized protein {ECO:0000313|EMBL:EZP55543.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
A2-16-all-fractions_k255_3146401_7
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3795..4340)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Phenylobacterium zucineum (strain HLK1) RepID=B4RCN0_PHEZH
Uncharacterized protein {ECO:0000313|EMBL:GAO38410.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
hypothetical protein
A2-16-all-fractions_k255_3146401_8
unknown

Not on your lists

4417..4614
DNA (198bp) protein (66aa)

This feature has no annotations

A2-16-all-fractions_k255_3146401_9
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4732..6009
DNA (1278bp) protein (426aa)
homogentisate 1,2-dioxygenase (EC:1.13.11.5)
homogentisate 1,2-dioxygenase n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI000378DEFC
Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:GAO40931.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
A2-16-all-fractions_k255_3146401_10
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6006..7262
DNA (1257bp) protein (419aa)
Fumarylacetoacetase {ECO:0000313|EMBL:EZP71114.1}; EC=3.7.1.2 {ECO:0000313|EMBL:EZP71114.1};; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0GSE0_9SPHN
fumarylacetoacetase
A2-16-all-fractions_k255_3146401_11
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7254..8177)
DNA (924bp) protein (308aa)
apbA; 2-dehydropantoate 2-reductase ApbA (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
2-dehydropantoate 2-reductase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LM31_9BURK
A2-16-all-fractions_k255_3146401_12
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8225..8932
DNA (708bp) protein (236aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EJE1_9SPHN
Zn-dependent hydrolase
Uncharacterized protein {ECO:0000313|EMBL:EHJ58582.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
A2-16-all-fractions_k255_3146401_13
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8929..9828)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B52C13
hypothetical protein
Tax=BJP_IG2158_Methylococcales_50_91
A2-16-all-fractions_k255_3146401_14
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10325..11716
DNA (1392bp) protein (464aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI0002880703
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
A2-16-all-fractions_k255_3146401_15
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11800..16437
DNA (4638bp) protein (1546aa)
glutamate dehydrogenase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI0002488AD1
NAD-specific glutamate dehydrogenase {ECO:0000313|EMBL:AGH48897.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
NAD-specific glutamate dehydrogenase
A2-16-all-fractions_k255_3146401_16
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16437..17312
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WG27_9SPHN
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
A2-16-all-fractions_k255_3146401_17
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17257..17502)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J4Y7_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB31897.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
arylsulfate sulfotransferase
A2-16-all-fractions_k255_3146401_18
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17502..18224)
DNA (723bp) protein (241aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
acetoacetyl-CoA reductase n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000378F924
Putative acetoacetyl-CoA reductase {ECO:0000313|EMBL:GAO39418.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas changbaiensis NBRC 104936.;"
A2-16-all-fractions_k255_3146401_19
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18255..19250)
DNA (996bp) protein (332aa)
hemH; ferrochelatase (EC:4.99.1.1)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_00323}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
ferrochelatase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B54C2F
A2-16-all-fractions_k255_3146401_20

Not on your lists

comp(19247..21355)
DNA (2109bp) protein (703aa)
Putative aldehyde dehydrogenase n=1 Tax=uncultured bacterium RepID=A3RGW5_9BACT
Putative aldehyde dehydrogenase {ECO:0000313|EMBL:ABN71550.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
isoquinoline 1-oxidoreductase
A2-16-all-fractions_k255_3146401_21

Not on your lists

comp(21352..23013)
DNA (1662bp) protein (554aa)
Putative AMP-dependent synthetase and/or long-chain-fatty-acid-CoA ligase n=1 Tax=uncultured bacterium RepID=A3RGW4_9BACT
Putative AMP-dependent synthetase and/or long-chain-fatty-acid-CoA ligase {ECO:0000313|EMBL:ABN71549.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
AMP-dependent synthetase and ligase
A2-16-all-fractions_k255_3146401_22

Not on your lists

23072..23971
DNA (900bp) protein (300aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Prolipoprotein diacylglyceryl transferase n=1 Tax=uncultured bacterium RepID=A3RGW3_9BACT
diacylglyceryl transferase
A2-16-all-fractions_k255_3146401_23

Not on your lists

23968..25467
DNA (1500bp) protein (500aa)
Uncharacterized conserved protein n=1 Tax=uncultured bacterium RepID=A3RGW2_9BACT
Uncharacterized conserved protein {ECO:0000313|EMBL:ABN71547.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
A2-16-all-fractions_k255_3146401_24
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25464..26231
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000370FE6F
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
hypothetical protein
A2-16-all-fractions_k255_3146401_25
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26319..27629
DNA (1311bp) protein (437aa)
methionine gamma-lyase (EC:4.4.1.11)
Methionine gamma-lyase {ECO:0000313|EMBL:AJP73994.1}; EC=4.4.1.11 {ECO:0000313|EMBL:AJP73994.1};; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
methionine gamma-lyase n=1 Tax=Sphingomonas sp. ATCC 31555 RepID=UPI0002E89B81
A2-16-all-fractions_k255_3146401_26
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27635..28414
DNA (780bp) protein (260aa)
Enoyl-CoA hydratase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HV17_9RHIZ
Enoyl-CoA hydratase {ECO:0000313|EMBL:EHK55415.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
enoyl-CoA hydratase
A2-16-all-fractions_k255_3146401_27
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28460..29020
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI0002EF4027
NADPH-dependent FMN reductase
Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
A2-16-all-fractions_k255_3146401_28
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29022..30488
DNA (1467bp) protein (489aa)
glycerol kinase n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000379305D
Glycerol kinase {ECO:0000313|EMBL:KEZ19588.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
glycerol kinase
A2-16-all-fractions_k255_3146401_29
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30678..31388
DNA (711bp) protein (237aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2INX1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KKC27859.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
hypothetical protein
A2-16-all-fractions_k255_3146401_30
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31465..32136)
DNA (672bp) protein (224aa)
HAD-superfamily hydrolase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S4W4_9SPHN
HAD-superfamily hydrolase
HAD-superfamily hydrolase {ECO:0000313|EMBL:AGH49963.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
Displaying items 1-30 of 36 in total

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