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A2-16-all-fractions_k255_449672

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A2-16-all-fractions_k255_449672_1
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..1407)
DNA (1407bp) protein (469aa)
Protein translocase subunit SecD n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SCF0_METPP
secD; preprotein translocase subunit SecD
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A2-16-all-fractions_k255_449672_2
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1513..1836)
DNA (324bp) protein (108aa)
Preprotein translocase, YajC subunit n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKS7_9BURK
Preprotein translocase, YajC subunit {ECO:0000313|EMBL:EHR73081.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
protein translocase subunit yajC
A2-16-all-fractions_k255_449672_3
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2037..2792)
DNA (756bp) protein (252aa)
Diguanylate cyclase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y766_LEPCP
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ACB33693.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A2-16-all-fractions_k255_449672_4
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2871..3803
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SU0_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD71163.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
A2-16-all-fractions_k255_449672_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4048..4782
DNA (735bp) protein (245aa)
Pirin-related protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WM13_9BURK
pirin domain-containing protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A2-16-all-fractions_k255_449672_6
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4814..6103
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Advenella kashmirensis W13003 RepID=V8QKW9_9BURK
Cys/Met metabolism PLP-dependent enzyme {ECO:0000313|EMBL:KCB43809.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
putative O-acetylhomoserine (thiol)-lyase
A2-16-all-fractions_k255_449672_7
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6188..7090)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Streptomyces prunicolor RepID=UPI00036F7BEB
bacterial regulatory helix-turn-helix s, AraC family protein
Bacterial regulatory helix-turn-helix s, AraC family protein {ECO:0000313|EMBL:CDG84289.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
A2-16-all-fractions_k255_449672_8
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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7246..8088
DNA (843bp) protein (281aa)
short-chain dehydrogenase n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI0003818357
NAD dependent epimerase/dehydratase family {ECO:0000313|EMBL:EDX78898.1}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
3-oxoacyl-ACP reductase
A2-16-all-fractions_k255_449672_9
Ralstonia mannitolilytica, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8445..11204)
DNA (2760bp) protein (920aa)
Aconitate hydratase {ECO:0000256|RuleBase:RU361275}; Short=Aconitase {ECO:0000256|RuleBase:RU361275};; EC=4.2.1.3 {ECO:0000256|RuleBase:RU361275};; TaxID=105219 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia mannitolilytica.;"
acnA; aconitate hydratase (EC:4.2.1.3)
aconitate hydratase n=1 Tax=Caldimonas manganoxidans RepID=UPI000362DD23
A2-16-all-fractions_k255_449672_10
unknown

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11389..12108
DNA (720bp) protein (240aa)

This feature has no annotations

A2-16-all-fractions_k255_449672_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12135..12533
DNA (399bp) protein (133aa)
Class I peptide chain release factor n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VAW4_VARPE
class i peptide chain release factor
Class I peptide chain release factor {ECO:0000313|EMBL:ADU36318.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
A2-16-all-fractions_k255_449672_12
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12530..13162
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y176_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG93477.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
A2-16-all-fractions_k255_449672_13
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(13165..14223)
DNA (1059bp) protein (353aa)
Probable RNA methyltransferase Mpe_A3613; EC=2.1.1.-;; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
50S rRNA methyltransferase n=1 Tax=Curvibacter lanceolatus RepID=UPI0003824098
ribosomal RNA large subunit methyltransferase N
A2-16-all-fractions_k255_449672_14
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(14425..15390)
DNA (966bp) protein (322aa)
peptidoglycan-binding domain 1 protein id=12496713 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
peptidoglycan-binding domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
A2-16-all-fractions_k255_449672_15
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15615..18398
DNA (2784bp) protein (928aa)
Multi-sensor hybrid histidine kinase n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MTB5_9BURK
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:EIK92455.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;"
histidine kinase
Displaying 15 items

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