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A2-16-all-fractions_k255_606765

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A2-16-all-fractions_k255_606765_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3..1274
DNA (1272bp) protein (424aa)
phosphohydrolase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B6D730
putative HD-GYP hydrolase domain containing protein
Putative HD-GYP hydrolase domain containing protein {ECO:0000313|EMBL:BAL97772.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A2-16-all-fractions_k255_606765_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1271..3334
DNA (2064bp) protein (688aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C322C
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A2-16-all-fractions_k255_606765_3
unknown

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comp(3353..3520)
DNA (168bp) protein (56aa)

This feature has no annotations

A2-16-all-fractions_k255_606765_4
unknown

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3684..3884
DNA (201bp) protein (67aa)

This feature has no annotations

A2-16-all-fractions_k255_606765_5
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3881..4354
DNA (474bp) protein (158aa)
Response regulator receiver domain protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21XA5_RHOFD
response regulator receiver domain-containing protein
Response regulator receiver domain protein {ECO:0000313|EMBL:ABD69598.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
A2-16-all-fractions_k255_606765_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4583..4951
DNA (369bp) protein (123aa)
hypothetical protein
hypothetical protein id=5079307 bin=GWF1_Burkholderiales_GWF1_66_17 species=Burkholderiales bacterium JOSHI_001 genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A2-16-all-fractions_k255_606765_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5054..5356
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ79_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR73298.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A2-16-all-fractions_k255_606765_8
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5378..6073
DNA (696bp) protein (232aa)
phosphoglycerate mutase (EC:5.4.2.1)
phosphoglycerate mutase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034888D3
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A2-16-all-fractions_k255_606765_9
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6185..7174)
DNA (990bp) protein (330aa)
ruvB; holliday junction ATP-dependent DNA helicase RuvB (EC:3.6.4.12)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HXM3_RUBGI
A2-16-all-fractions_k255_606765_10
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7369..7791
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y1G4_LEPCP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB34263.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A2-16-all-fractions_k255_606765_11
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7939..8511)
DNA (573bp) protein (191aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Holliday junction DNA helicase RuvA n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034A2803
ruvA; Holliday junction DNA helicase RuvA
A2-16-all-fractions_k255_606765_12
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8537..9634
DNA (1098bp) protein (366aa)
Phosphate starvation-inducible protein PhoH, predicted ATPase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WQ66_9BURK
Phosphate starvation-inducible protein PhoH, predicted ATPase {ECO:0000313|EMBL:EHR73285.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
phoH-like protein
A2-16-all-fractions_k255_606765_13
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9634..10086
DNA (453bp) protein (151aa)
Endoribonuclease YbeY {ECO:0000255|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00009};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
Endoribonuclease YbeY n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=YBEY_METPP
hypothetical protein
A2-16-all-fractions_k255_606765_14
unknown

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10192..10410
DNA (219bp) protein (73aa)

This feature has no annotations

A2-16-all-fractions_k255_606765_15
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10487..10951
DNA (465bp) protein (155aa)
Host attachment protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LU02_9BURK
Host attachment protein {ECO:0000313|EMBL:EGJ11820.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
A2-16-all-fractions_k255_606765_16
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10985..11773)
DNA (789bp) protein (263aa)
delta-aminolevulinic acid dehydratase n=1 Tax=Burkholderia ubonensis RepID=UPI00016A43BB
delta-aminolevulinic acid dehydratase family protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Displaying 16 items

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