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A2-16-all-fractions_k255_2419684

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A2-16-all-fractions_k255_2419684_1
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..1957
DNA (1956bp) protein (652aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
ribonucleotide-diphosphate reductase subunit alpha n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B46361
A2-16-all-fractions_k255_2419684_2
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2249..3484
DNA (1236bp) protein (412aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta n=1 Tax=Acidovorax sp. NO-1 RepID=H0C0T7_9BURK
A2-16-all-fractions_k255_2419684_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3716..4219
DNA (504bp) protein (168aa)
Putative histone H1/H5 family protein, HCT subfamily n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CNI9_VARPS
Variovorax paradoxus strain MEDvA23 contig_17, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34169.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
histone H1/H5 family protein, HCT subfamily
A2-16-all-fractions_k255_2419684_4
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4461..4781
DNA (321bp) protein (107aa)
UPF0235 protein RBXJA2T_02622 n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LLH1_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A2-16-all-fractions_k255_2419684_5
unknown

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comp(5161..5316)
DNA (156bp) protein (52aa)

This feature has no annotations

A2-16-all-fractions_k255_2419684_6
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5330..6235)
DNA (906bp) protein (302aa)
sugar kinase transferase (EC:2.7.1.-)
sugar kinase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003461E8E
Sugar kinase, ribokinase {ECO:0000313|EMBL:EHR73055.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
A2-16-all-fractions_k255_2419684_7
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6269..7789)
DNA (1521bp) protein (507aa)
hypothetical protein n=1 Tax=Acidovorax avenae RepID=UPI00030BB951
Uncharacterized protein {ECO:0000313|EMBL:KDB52595.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
Zinc finger-domain-containing protein
A2-16-all-fractions_k255_2419684_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7997..8905)
DNA (909bp) protein (303aa)
prmA; ribosomal protein L11 methyltransferase PrmA (EC:2.1.1.-)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189468};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Ribosomal protein L11 methyltransferase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HX26_RUBGI
A2-16-all-fractions_k255_2419684_9
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8905..10254)
DNA (1350bp) protein (450aa)
accC; acetyl-CoA carboxylase, biotin carboxylase AccC (EC:6.3.4.14 6.4.1.2)
Putative biotin carboxylase protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRN2_9BURK
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
A2-16-all-fractions_k255_2419684_10
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10266..10739)
DNA (474bp) protein (158aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Polaromonas sp. CF318 RepID=J2LQ45_9BURK
biotin carboxyl carrier protein
Acetyl-CoA carboxylase, biotin carboxyl carrier protein {ECO:0000313|EMBL:EJL87438.1}; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
A2-16-all-fractions_k255_2419684_11
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10808..11251)
DNA (444bp) protein (148aa)
3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase n=1 Tax=Caldimonas manganoxidans RepID=UPI0003616B21
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A2-16-all-fractions_k255_2419684_12
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11464..12033)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI000362D797
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EGJ11083.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
transmembrane thioredoxin-related protein
A2-16-all-fractions_k255_2419684_13
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12030..12629)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRW4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ11082.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
A2-16-all-fractions_k255_2419684_14
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12721..13488)
DNA (768bp) protein (256aa)
peptidoglycan transglycosylase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034AC09C
monofunctional biosynthetic peptidoglycan transglycosylase
Monofunctional biosynthetic peptidoglycan transglycosylase {ECO:0000313|EMBL:ACB36236.1}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A2-16-all-fractions_k255_2419684_15
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13485..14357)
DNA (873bp) protein (291aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
aroE; shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LRW2_9BURK
A2-16-all-fractions_k255_2419684_16
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14361..15257)
DNA (897bp) protein (299aa)
cell envelope biogenesis protein TonB n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003488640
TonB family protein {ECO:0000313|EMBL:EHR73046.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
TonB family protein
Displaying 16 items

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