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A2-16-all-fractions_k255_2569274

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A2-16-all-fractions_k255_2569274_1
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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144..1367
DNA (1224bp) protein (408aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
RNA-splicing ligase RtcB n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q060_ACIAP
hypothetical protein
A2-16-all-fractions_k255_2569274_2
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1414..2235
DNA (822bp) protein (274aa)
Nucleotidyltransferase n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q061_ACIAP
nucleotidyltransferase
Nucleotidyltransferase {ECO:0000313|EMBL:ADX43944.1}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
A2-16-all-fractions_k255_2569274_3
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2249..3286
DNA (1038bp) protein (346aa)
RNA 3'-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 {ECO:0000256|HAMAP-Rule:MF_00200};; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
RNA 3''''-terminal-phosphate cyclase n=1 Tax=Ideonella sp. B508-1 RepID=UPI000346013A
A2-16-all-fractions_k255_2569274_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3377..5356)
DNA (1980bp) protein (660aa)
Peptidase M41 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V4S6_VARPE
peptidase m41
Peptidase M41 {ECO:0000313|EMBL:ADU37012.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
A2-16-all-fractions_k255_2569274_5
Radopholus similis, Radopholus, Tylenchida, Chromadorea, Nematoda, Metazoa

Not on your lists

comp(5896..7908)
DNA (2013bp) protein (671aa)
Glucosylceramidase {ECO:0000256|RuleBase:RU361188}; EC=3.2.1.45 {ECO:0000256|RuleBase:RU361188};; TaxID=46012 species="Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Tylenchida; Tylenchina; Tylenchoidea; Pratylenchidae; Radopholinae; Radopholus.;" source="Radopholus similis (Burrowing nematode).;"
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037ED0D7
xylan degradation protein
A2-16-all-fractions_k255_2569274_6
Stenotrophomonas sp. SKA14, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8421..9284
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000365D176
Putative uncharacterized protein {ECO:0000313|EMBL:EED40529.1}; TaxID=391601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas sp. SKA14.;"
hypothetical membrane protein
A2-16-all-fractions_k255_2569274_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9305..9952)
DNA (648bp) protein (216aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLW4_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71450.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A2-16-all-fractions_k255_2569274_8
unknown

Not on your lists

comp(9958..10173)
DNA (216bp) protein (72aa)

This feature has no annotations

A2-16-all-fractions_k255_2569274_9
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10256..11050)
DNA (795bp) protein (265aa)
Type III secretion protein SpaR/YscT/HrcT n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK97_9BURK
Type III secretion protein SpaR/YscT/HrcT {ECO:0000313|EMBL:EHR71412.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hscT; type III secretory pathway protein
A2-16-all-fractions_k255_2569274_10
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11066..11332)
DNA (267bp) protein (89aa)
Type III secretion protein, HrpO family n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK98_9BURK
Type III secretion protein, HrpO family {ECO:0000313|EMBL:EHR71413.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
sctS; type iii secretion component protein scts
A2-16-all-fractions_k255_2569274_11
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11337..11990)
DNA (654bp) protein (218aa)
Type III secretion apparatus protein, YscR/HrcR family n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK99_9BURK
Type III secretion apparatus protein, YscR/HrcR family {ECO:0000313|EMBL:EHR71414.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hscR; type III secretory pathway protein
A2-16-all-fractions_k255_2569274_12
unknown

Not on your lists

comp(12090..13157)
DNA (1068bp) protein (356aa)

This feature has no annotations

A2-16-all-fractions_k255_2569274_13
unknown

Not on your lists

comp(13183..14187)
DNA (1005bp) protein (335aa)

This feature has no annotations

A2-16-all-fractions_k255_2569274_14
gamma proteobacterium HIMB55, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14354..15586)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NTY8_9GAMM
collagen triple helix repeat protein
Uncharacterized protein {ECO:0000313|EMBL:EHQ58303.1}; TaxID=745014 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium HIMB55.;"
A2-16-all-fractions_k255_2569274_15
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15678..16397)
DNA (720bp) protein (240aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLW0_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71446.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
A2-16-all-fractions_k255_2569274_16
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17063..17938)
DNA (876bp) protein (292aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WK93_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71408.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A2-16-all-fractions_k255_2569274_17
unknown

Not on your lists

comp(18087..18959)
DNA (873bp) protein (291aa)

This feature has no annotations

A2-16-all-fractions_k255_2569274_18
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18973..19638)
DNA (666bp) protein (222aa)
Transcriptional regulatory protein fixJ n=1 Tax=Brevundimonas diminuta ATCC 11568 RepID=F4R0N5_BREDI
two component LuxR family transcriptional regulator
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
A2-16-all-fractions_k255_2569274_19
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19635..20723)
DNA (1089bp) protein (363aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
Histidine kinase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKA3_9BURK
PAS/PAC sensor signal transduction histidine kinase
A2-16-all-fractions_k255_2569274_20
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20785..21513)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQQ3_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10671.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
GNAT family acetyltransferase
A2-16-all-fractions_k255_2569274_21
unknown

Not on your lists

comp(21518..21916)
DNA (399bp) protein (133aa)

This feature has no annotations

A2-16-all-fractions_k255_2569274_22
unknown

Not on your lists

comp(22450..22932)
DNA (483bp) protein (161aa)

This feature has no annotations

A2-16-all-fractions_k255_2569274_23
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22929..24284)
DNA (1356bp) protein (452aa)
Type III secretion system ATPase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQS4_9BURK
Type III secretion system ATPase {ECO:0000313|EMBL:EGJ10692.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hscN; type III secretion system ATPase
A2-16-all-fractions_k255_2569274_24
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24281..24910)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQS5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ10693.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
A2-16-all-fractions_k255_2569274_25
unknown

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comp(24907..25497)
DNA (591bp) protein (197aa)

This feature has no annotations

A2-16-all-fractions_k255_2569274_26
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25494..26285)
DNA (792bp) protein (264aa)
Type III secretion apparatus lipoprotein, YscJ/HrcJ family n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLT9_9BURK
type III secretion apparatus lipoprotein, YscJ/HrcJ family
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
A2-16-all-fractions_k255_2569274_27
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26290..26703)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LQS9_9BURK
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
A2-16-all-fractions_k255_2569274_28
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26785..26922)
DNA (138bp) protein (46aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WLU1_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71427.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
Displaying 28 items

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