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A2-16-all-fractions_k255_4038544

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A2-16-all-fractions_k255_4038544_1
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3..758
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025Y5_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16300.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
A2-16-all-fractions_k255_4038544_2
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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922..1371
DNA (450bp) protein (150aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
msrB1; methionine sulfoxide reductase B (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWL7_9GAMM
A2-16-all-fractions_k255_4038544_3
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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1368..1871
DNA (504bp) protein (168aa)
methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
methionine sulfoxide reductase A n=1 Tax=Dyella japonica RepID=UPI0002F795C3
A2-16-all-fractions_k255_4038544_4

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comp(2016..2606)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0003667068
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49488.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
A2-16-all-fractions_k255_4038544_5
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2770..3369
DNA (600bp) protein (200aa)
Transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XE70_VARPD
transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACS20606.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A2-16-all-fractions_k255_4038544_6
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3508..3681
DNA (174bp) protein (58aa)
membrane protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI00031B9254
membrane protein
Membrane protein {ECO:0000313|EMBL:KHQ98527.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
A2-16-all-fractions_k255_4038544_7
Ralstonia sp. 5_2_56FAA, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3687..5183
DNA (1497bp) protein (499aa)
Transporter, SSS family n=2 Tax=Ralstonia RepID=E2STY1_9RALS
Uncharacterized protein {ECO:0000313|EMBL:EGY65878.1}; TaxID=658080 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. 5_2_56FAA.;"
sodium:solute symporter
A2-16-all-fractions_k255_4038544_8
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5237..6610
DNA (1374bp) protein (458aa)
transmembrane sensor histidine kinase transcription regulator protein (EC:2.7.3.-)
Putative transmembrane sensor histidine kinase transcription regulator protein {ECO:0000313|EMBL:ABM93989.1}; EC=2.7.3.- {ECO:0000313|EMBL:ABM93989.1};; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
sensor histidine kinase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034D1D01
Displaying 8 items

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