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A2-16-all-fractions_k255_4809033

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A2-16-all-fractions_k255_4809033_1
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..608)
DNA (606bp) protein (202aa)
acyl-CoA synthetase (EC:6.2.1.-)
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0EXS4_CUPNN
AMP-binding domain protein {ECO:0000313|EMBL:KDB53411.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
A2-16-all-fractions_k255_4809033_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(718..1248)
DNA (531bp) protein (177aa)
Lipid A deacylase {ECO:0000256|PIRNR:PIRNR029681}; EC=3.1.1.77 {ECO:0000256|PIRNR:PIRNR029681};; LPS 3-O-deacylase {ECO:0000256|PIRNR:PIRNR029681}; Outer membrane enzyme {ECO:0000256|PIRNR:PIRNR029681}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
Lipid A deacylase n=1 Tax=Variovorax paradoxus B4 RepID=T1XLM9_VARPD
putative lipid A 3-O-deacylase
A2-16-all-fractions_k255_4809033_3
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1398..2207)
DNA (810bp) protein (270aa)
DNase TatD n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SCB7_9BURK
DNase TatD {ECO:0000313|EMBL:EHP39895.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
Deoxyribonuclease TatD
A2-16-all-fractions_k255_4809033_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2288..3742)
DNA (1455bp) protein (485aa)
aldehyde dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI000382A65A
Variovorax paradoxus strain MEDvA23 contig_10, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ35298.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
aldehyde dehydrogenase
A2-16-all-fractions_k255_4809033_5
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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4174..4506
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003485A40
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO28609.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogenivorans sk43H.;"
A2-16-all-fractions_k255_4809033_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4731..5978)
DNA (1248bp) protein (416aa)
Putative porphyrin biosynthesis-like protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LUY7_9BURK
Putative porphyrin biosynthesis-like protein {ECO:0000313|EMBL:EGJ12155.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hemY; putative protoporphyrinogen IX and coproporphyrinogen III oxidase HemY
A2-16-all-fractions_k255_4809033_7
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5996..7192)
DNA (1197bp) protein (399aa)
hemX; putative uroporphyrinogen-III C-methyltransferase (EC:2.1.1.107)
Putative uroporphyrinogen-III C-methyltransferase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVE7_RUBGI
Putative enzyme of heme biosynthesis {ECO:0000313|EMBL:EHR70245.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
A2-16-all-fractions_k255_4809033_8
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7280..8086)
DNA (807bp) protein (269aa)
hemD; uroporphyrinogen-III synthase HemD (EC:4.2.1.75)
Uroporphyrinogen-III synthase HemD n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HVE8_RUBGI
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A2-16-all-fractions_k255_4809033_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8088..9068)
DNA (981bp) protein (327aa)
hydroxymethylbilane synthase (EC:2.5.1.61)
porphobilinogen deaminase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034914C2
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A2-16-all-fractions_k255_4809033_10
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9187..11715
DNA (2529bp) protein (843aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.1.1.31 {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769};; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
ppc; phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WL53_9BURK
Displaying 10 items

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