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A2-16-all-fractions_k255_5194134

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A2-16-all-fractions_k255_5194134_1
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(56..1165)
DNA (1110bp) protein (370aa)
D-alanine--D-alanine ligase A {ECO:0000255|HAMAP-Rule:MF_00047}; EC=6.3.2.4 {ECO:0000255|HAMAP-Rule:MF_00047};; D-Ala-D-Ala ligase A {ECO:0000255|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase A {ECO:0000255|HAMAP-Rule:MF_00047}; TaxID=160488 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (strain KT2440).;"
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI0003742F50
ddlA; D-alanine--D-alanine ligase
A2-16-all-fractions_k255_5194134_2
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1702..2604
DNA (903bp) protein (301aa)
Extracellular solute-binding protein family 3 n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XWS9_LEPCP
extracellular solute-binding protein
Extracellular solute-binding protein family 3 {ECO:0000313|EMBL:ACB36278.1}; Flags: Precursor;; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
A2-16-all-fractions_k255_5194134_3
Oxalobacteraceae bacterium IMCC9480, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2897..3940
DNA (1044bp) protein (348aa)
Putative porin n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VUR5_9BURK
Putative porin {ECO:0000313|EMBL:EGF33656.1}; TaxID=937450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae.;" source="Oxalobacteraceae bacterium IMCC9480.;"
gram-negative type outer membrane porin protein
A2-16-all-fractions_k255_5194134_4
Parvibaculum lavamentivorans, Parvibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3980..4639)
DNA (660bp) protein (220aa)
Transcriptional regulator, TetR family n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HS63_PARL1
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABS62746.1}; TaxID=402881 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Parvibaculum.;" source="Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966).;"
A2-16-all-fractions_k255_5194134_5
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5134..5916
DNA (783bp) protein (261aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPX0_RUBGI
A2-16-all-fractions_k255_5194134_6
unknown

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6033..6272
DNA (240bp) protein (80aa)

This feature has no annotations

A2-16-all-fractions_k255_5194134_7
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6283..6747)
DNA (465bp) protein (155aa)
Cation diffusion facilitator family transporter n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QG92_NITHX
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ABE64755.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
Displaying 7 items

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