ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

A2-18-all-fractions_k255_1391073_3

Organism: A2-18-all-fractions_metab_conc_122

megabin RP 43 / 55 MC: 10 BSCG 48 / 51 MC: 13 ASCG 11 / 38 MC: 3
Location: comp(1236..1742)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FEB1_VERMA similarity UNIREF
DB: UNIREF100
  • Identity: 60.0
  • Coverage: 160.0
  • Bit_score: 195
  • Evalue 3.50e-47
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 60.0
  • Coverage: 160.0
  • Bit_score: 195
  • Evalue 9.80e-48
RNA polymerase, sigma-24 subunit, ECF subfamily protein {ECO:0000313|EMBL:AEB46177.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.0
  • Coverage: 160.0
  • Bit_score: 195
  • Evalue 4.80e-47

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Verrucosispora maris → Verrucosispora → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 507
GTGGCTGACCGTTCGGACTACCCGGAGTTCGTGGCCGCCTGCTGGACGCGCCTGCTGCGGACCGCCTACCTGCTGGTCCAGGACTGGGCGGCGGCCGAGGACCTGACCCAGGCGGCCCTGGTCAAGGCGTGGCTGGCCTGGCCGCGGCTGGACGACGACCCGGAAGCCTACGTCCGGAAGATCATCGTCACCACCCACGTGTCGTGGTGGCGGCGACGCTGGCGGCACCGGGAATGGACCACCGGCGAGCCCCCCGAGCGACCGAACGCCGCGAACGAGACCGACACCGTCGACGAGCGCGACGCCGTGTGGCGGGCGCTGGGCCGCCTGCCCGCGGGGCAGCGCGCCGTGGTGGTGCTGCGCTACTTCGAGGACATGACCGAAGCCCAGGTGGCCGGCCTCCTAGGGTGCTCCGTCGGCACGGTGAAGAGCCAGGCCAGCCGGGCCCTGGCCCGGCTGCGGGTCGATGACACGCTGCGACCGCAGCCGGTCGAGAAGGAGAGGTGA
PROTEIN sequence
Length: 169
VADRSDYPEFVAACWTRLLRTAYLLVQDWAAAEDLTQAALVKAWLAWPRLDDDPEAYVRKIIVTTHVSWWRRRWRHREWTTGEPPERPNAANETDTVDERDAVWRALGRLPAGQRAVVVLRYFEDMTEAQVAGLLGCSVGTVKSQASRALARLRVDDTLRPQPVEKER*