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A2-18-all-fractions_k255_2920280

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Displaying items 1-30 of 67 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A2-18-all-fractions_k255_2920280_1
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(253..1098)
DNA (846bp) protein (282aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVG2_PSEUX
Uncharacterized protein {ECO:0000313|EMBL:KGM48932.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
A2-18-all-fractions_k255_2920280_2
Deinococcus sp. RL, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

1263..1817
DNA (555bp) protein (185aa)
Acetyl-CoA carboxylase, biotin carboxyl carrier protein n=1 Tax=Deinococcus proteolyticus (strain ATCC 35074 / DSM 20540 / JCM 6276 / NBRC 101906 / NCIMB 13154 / VKM Ac-1939 / CCM 2703) RepID=F0RJ65_DEIPM
Acetyl-CoA carboxylase {ECO:0000313|EMBL:KEF34660.1}; TaxID=1489678 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus sp. RL.;"
acetyl-CoA carboxylase, biotin carboxyl carrier protein
A2-18-all-fractions_k255_2920280_3
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1823..3199
DNA (1377bp) protein (459aa)
Biotin carboxylase (EC:6.3.4.14)
Biotin carboxylase {ECO:0000313|EMBL:AEA23784.1}; EC=6.3.4.14 {ECO:0000313|EMBL:AEA23784.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Biotin carboxylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVG4_PSEUX
A2-18-all-fractions_k255_2920280_4
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3199..4665
DNA (1467bp) protein (489aa)
pyruvate carboxylase (EC:6.4.1.1)
Pyruvate carboxylase {ECO:0000313|EMBL:AEA23785.1}; EC=6.4.1.1 {ECO:0000313|EMBL:AEA23785.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
Pyruvate carboxylase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVG5_PSEUX
A2-18-all-fractions_k255_2920280_5
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4668..5579
DNA (912bp) protein (304aa)
putative gluconolactonase (EC:3.1.1.17)
gluconolactonase n=1 Tax=Patulibacter americanus RepID=UPI0003B7A6F2
SMP-30/Gluconolaconase/LRE domain protein {ECO:0000313|EMBL:CCM64251.1}; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix parvicella RN1.;"
A2-18-all-fractions_k255_2920280_6
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

5752..7116
DNA (1365bp) protein (455aa)
AMP-dependent synthetase and ligase n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AZ49_RUBXD
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ABG03329.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
A2-18-all-fractions_k255_2920280_7
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7091..7921)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2HEJ4_9SPHN
Scaffold1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS34214.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
short-chain dehydrogenase/reductase sdr
A2-18-all-fractions_k255_2920280_8
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7997..9055
DNA (1059bp) protein (353aa)
threonine dehydrogenase n=1 Tax=Amycolatopsis methanolica RepID=UPI000372F826
adh; threonine dehydrogenase and related Zn-dependent dehydrogenase
Threonine dehydrogenase and related Zn-dependent dehydrogenase {ECO:0000313|EMBL:AIJ21922.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
A2-18-all-fractions_k255_2920280_9
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9052..10404
DNA (1353bp) protein (451aa)
Catalytic domain of component of various dehydrogenase complexes n=1 Tax=Frankia sp. EUN1f RepID=D3CU97_9ACTO
Catalytic domain of component of various dehydrogenase complexes {ECO:0000313|EMBL:EFC85796.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
A2-18-all-fractions_k255_2920280_10
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

10412..12235
DNA (1824bp) protein (608aa)
Long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:EHN10485.1}; EC=6.2.1.3 {ECO:0000313|EMBL:EHN10485.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Long-chain-fatty-acid--CoA ligase n=1 Tax=Patulibacter medicamentivorans RepID=H0E768_9ACTN
AMP-dependent synthetase and ligase
A2-18-all-fractions_k255_2920280_11
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

12232..13965
DNA (1734bp) protein (578aa)
X-Pro dipeptidyl-peptidase-like protein n=1 Tax=Patulibacter medicamentivorans RepID=H0E669_9ACTN
X-Pro dipeptidyl-peptidase-like protein {ECO:0000313|EMBL:EHN10838.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
peptidase S15
A2-18-all-fractions_k255_2920280_12
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13991..14791)
DNA (801bp) protein (267aa)
KR domain superfamily protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RZ61_9GAMM
KR domain superfamily protein {ECO:0000313|EMBL:EEB78116.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
3-oxoacyl-ACP reductase
A2-18-all-fractions_k255_2920280_13
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14928..17030
DNA (2103bp) protein (701aa)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:EFC83487.1}; EC=3.5.2.9 {ECO:0000313|EMBL:EFC83487.1};; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Frankia sp. EUN1f RepID=D3D0R5_9ACTO
Hydantoin utilization protein A
A2-18-all-fractions_k255_2920280_14
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17042..19333
DNA (2292bp) protein (764aa)
5-oxoprolinase (EC:3.5.2.9)
Hydantoinase B/oxoprolinase n=1 Tax=Frankia sp. EUN1f RepID=D3D0R4_9ACTO
Hydantoinase B/oxoprolinase {ECO:0000313|EMBL:EFC83486.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
A2-18-all-fractions_k255_2920280_15
Rhodococcus sp. AD45, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19334..20113)
DNA (780bp) protein (260aa)
3-oxoacyl-(Acyl-carrier-protein) reductase FabG {ECO:0000313|EMBL:KJF19284.1}; EC=1.1.1.100 {ECO:0000313|EMBL:KJF19284.1};; TaxID=103808 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. AD45.;"
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FK50_PELBH
putative oxidoreductase yxbG
A2-18-all-fractions_k255_2920280_16
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20142..21179)
DNA (1038bp) protein (346aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Thermobispora bispora (strain ATCC 19993 / DSM 43833 / CBS 139.67 / JCM 10125 / NBRC 14880 / R51) RepID=D6Y638_THEBD
NADP-dependent oxidoreductase {ECO:0000313|EMBL:ETK31706.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
alcohol dehydrogenase zinc-binding domain-containing protein
A2-18-all-fractions_k255_2920280_17
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21179..22195)
DNA (1017bp) protein (339aa)
Transketolase domain protein n=1 Tax=Frankia sp. EUN1f RepID=D3CU96_9ACTO
Transketolase domain protein {ECO:0000313|EMBL:EFC85795.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
TPP-dependent acetoin dehydrogenase complex, E1 protein subunit beta
A2-18-all-fractions_k255_2920280_18
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22192..23154)
DNA (963bp) protein (321aa)
Pyruvate dehydrogenase (Acetyl-transferring) {ECO:0000313|EMBL:EFC85794.1}; EC=1.2.4.1 {ECO:0000313|EMBL:EFC85794.1};; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Frankia sp. EUN1f RepID=D3CU95_9ACTO
hypothetical protein
A2-18-all-fractions_k255_2920280_19
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23179..24009)
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Nocardiopsis gilva RepID=UPI0003476C33
acetoacetate decarboxylase protein
Acetoacetate decarboxylase protein {ECO:0000313|EMBL:AGS26558.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
A2-18-all-fractions_k255_2920280_20
Williamsia sp. D3, Williamsia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24175..24627
DNA (453bp) protein (151aa)
Phosphoserine aminotransferase n=1 Tax=Williamsia sp. D3 RepID=V8D5C5_9ACTO
Phosphoserine aminotransferase {ECO:0000313|EMBL:ETD34597.1}; TaxID=1313067 species="Bacteria; Actinobacteria; Corynebacteriales; Williamsiaceae; Williamsia.;" source="Williamsia sp. D3.;"
hypothetical protein
A2-18-all-fractions_k255_2920280_21
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24750..26048
DNA (1299bp) protein (433aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000363DDD3
Lipoprotein {ECO:0000313|EMBL:EDY54740.1}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
lipoprotein
A2-18-all-fractions_k255_2920280_22
Streptomyces sviceus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26090..28855
DNA (2766bp) protein (922aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI0003776101
Putative uncharacterized protein {ECO:0000313|EMBL:EDY54741.2}; TaxID=463191 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sviceus ATCC 29083.;"
ABC transporter
A2-18-all-fractions_k255_2920280_23
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28852..29577
DNA (726bp) protein (242aa)
Putative high-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind) {ECO:0000313|EMBL:CAJ59002.1}; EC=3.6.3.- {ECO:0000313|EMBL:CAJ59002.1};; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
Putative high-affinity branched-chain amino acid transport protein (ABC superfamily, atp_bind) n=1 Tax=Frankia alni (strain ACN14a) RepID=Q0RTU6_FRAAA
high-affinity branched-chain amino acid ABC transporter ATP-binding protein
A2-18-all-fractions_k255_2920280_24
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(29612..30826)
DNA (1215bp) protein (405aa)
propanoyl-CoA C-acyltransferase (EC:2.3.1.176)
Propanoyl-CoA C-acyltransferase id=4468134 bin=GWC2_Methylomirabilis_70_16 species=Pseudonocardia dioxanivorans genus=Pseudonocardia taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Tax=GWC2_Rokubacteria_70_16_curated
A2-18-all-fractions_k255_2920280_25
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30830..31621)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E847_9SPHN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ62387.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
A2-18-all-fractions_k255_2920280_26
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(31657..32409)
DNA (753bp) protein (251aa)
Putative L-asparagine operon transcriptional regulator (Repressor) protein GntR family n=1 Tax=Patulibacter medicamentivorans RepID=H0E661_9ACTN
Putative L-asparagine operon transcriptional regulator (Repressor) protein GntR family {ECO:0000313|EMBL:EHN10830.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
hypothetical protein
A2-18-all-fractions_k255_2920280_27
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(32409..33398)
DNA (990bp) protein (330aa)
Acetoin dehydrogenase E1 component beta-subunit {ECO:0000313|EMBL:EHN10826.1}; EC=1.2.4.- {ECO:0000313|EMBL:EHN10826.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
Acetoin dehydrogenase E1 component beta-subunit n=1 Tax=Patulibacter medicamentivorans RepID=H0E657_9ACTN
transketolase
A2-18-all-fractions_k255_2920280_28
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(33382..34356)
DNA (975bp) protein (325aa)
Acetoin dehydrogenase E1 component alpha-subunit {ECO:0000313|EMBL:EHN10827.1}; EC=1.2.4.- {ECO:0000313|EMBL:EHN10827.1};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
pyruvate dehydrogenase (acetyl-transferring) (EC:1.2.4.1)
Acetoin dehydrogenase E1 component alpha-subunit n=1 Tax=Patulibacter medicamentivorans RepID=H0E658_9ACTN
A2-18-all-fractions_k255_2920280_29
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

34444..35742
DNA (1299bp) protein (433aa)
Pyruvate dehydrogenase complex E2 component dihydrolipoamide acetyltransferase n=1 Tax=Patulibacter medicamentivorans RepID=H0E659_9ACTN
Pyruvate dehydrogenase complex E2 component dihydrolipoamide acetyltransferase {ECO:0000313|EMBL:EHN10828.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medicamentivorans.;"
pyruvate dehydrogenase complex, E2 component, dihydrolipoamide acetyltransferase
A2-18-all-fractions_k255_2920280_30
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35730..36476
DNA (747bp) protein (249aa)
Putative short chain dehydrogenase n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YX26_NOCFA
putative oxidoreductase, SDR family
Putative oxidoreductase, SDR family {ECO:0000313|EMBL:AHH16385.1}; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
Displaying items 1-30 of 67 in total

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