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A3-16-all-fractions_k255_415446

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_415446_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..257
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DCQ1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF78182.1}; Flags: Fragment;; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
A3-16-all-fractions_k255_415446_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

558..1436
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00036CE2B9
Uncharacterized protein {ECO:0000313|EMBL:KGF78215.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative uncharacterized protein
A3-16-all-fractions_k255_415446_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1519..2409)
DNA (891bp) protein (297aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003686613
NAD-dependent dehydratase {ECO:0000313|EMBL:KGF78267.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
NAD dependent epimerase/dehydratase family protein
A3-16-all-fractions_k255_415446_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2422..3450
DNA (1029bp) protein (343aa)
ascD; CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase (EC:1.17.1.-)
ferredoxin n=1 Tax=Massilia niastensis RepID=UPI0003662F7A
CDP-6-deoxy-delta-3,4-glucoseen reductase {ECO:0000313|EMBL:KGF78268.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_415446_5
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3574..4317
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002FD895F
methyltransferase
Tax=RBG_16_Gamma2_60_9_curated
A3-16-all-fractions_k255_415446_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4434..5690
DNA (1257bp) protein (419aa)
MFS transporter n=1 Tax=Massilia niastensis RepID=UPI00037814A8
MFS transporter {ECO:0000313|EMBL:KGF78269.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
major Facilitator Superfamily protein
A3-16-all-fractions_k255_415446_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5693..6370
DNA (678bp) protein (226aa)
membrane protein n=1 Tax=Janthinobacterium lividum RepID=UPI0002890260
Membrane protein {ECO:0000313|EMBL:KGF78270.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
conserved hypothetical protein
A3-16-all-fractions_k255_415446_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6444..6818
DNA (375bp) protein (125aa)
Ribosomal subunit interface protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D8N0_9BURK
Ribosomal subunit interface protein {ECO:0000313|EMBL:KGF78271.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative uncharacterized protein
A3-16-all-fractions_k255_415446_9
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7032..8138
DNA (1107bp) protein (369aa)
Acyltransferase 3 n=1 Tax=Geitlerinema sp. PCC 7407 RepID=K9S8Y7_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:AHE56447.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
acyltransferase 3
A3-16-all-fractions_k255_415446_10
Methylobacter tundripaludum, Methylobacter, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8286..10901
DNA (2616bp) protein (872aa)
TonB-dependent receptor n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IVG8_9GAMM
TonB-dependent receptor {ECO:0000313|EMBL:EGW22895.1}; TaxID=697282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylobacter.;" source="Methylobacter tundripaludum SV96.;"
TonB-dependent receptor
A3-16-all-fractions_k255_415446_11
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11067..12773
DNA (1707bp) protein (569aa)
Sensory box protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60A83_METCA
sensory box protein
Sensory box protein {ECO:0000313|EMBL:AAU92959.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
A3-16-all-fractions_k255_415446_12
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12823..15243
DNA (2421bp) protein (807aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SZ9_RHOFD
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ABD71104.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
A3-16-all-fractions_k255_415446_13
Azospira oryzae, Azospira, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15233..16453
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY347 RepID=UPI00036D03CF
Response regulator receiver domain protein,histidine kinase
Response regulator receiver domain protein,histidine kinase {ECO:0000313|EMBL:AEV27797.1}; TaxID=640081 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azospira.;" source="Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) (Dechlorosoma; suillum).;"
A3-16-all-fractions_k255_415446_14
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16450..17082
DNA (633bp) protein (211aa)
DNA-binding response regulator, LuxR family, near polyamine transporter n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ACB7_COLFT
uhpA; LuxR family transcriptional regulator
DNA-binding response regulator, LuxR family, near polyamine transporter {ECO:0000313|EMBL:AEK62472.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
A3-16-all-fractions_k255_415446_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17154..18014)
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036FAF20
Metal ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGF78272.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_415446_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18082..19035
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036950E9
Uncharacterized protein {ECO:0000313|EMBL:KGF78273.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
diguanylate cyclase domain protein
A3-16-all-fractions_k255_415446_17
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19138..20586
DNA (1449bp) protein (483aa)
Exonuclease I {ECO:0000313|EMBL:KGF78274.1}; EC=3.1.11.1 {ECO:0000313|EMBL:KGF78274.1};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
exonuclease I n=1 Tax=Massilia niastensis RepID=UPI00037CE5BD
exonuclease family protein
A3-16-all-fractions_k255_415446_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20707..21930
DNA (1224bp) protein (408aa)
MFS transporter n=1 Tax=Burkholderia kururiensis RepID=UPI00034C2793
MFS transporter {ECO:0000313|EMBL:KGF78275.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
major facilitator superfamily protein
A3-16-all-fractions_k255_415446_19
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21941..22762)
DNA (822bp) protein (274aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DUM9_9BURK
A3-16-all-fractions_k255_415446_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22895..23506
DNA (612bp) protein (204aa)
LemA family protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036BBC83
LemA {ECO:0000313|EMBL:KGF78277.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
lipoprotein
A3-16-all-fractions_k255_415446_21
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23516..24391
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DA21_9BURK
Membrane protein {ECO:0000313|EMBL:KGF78278.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
glycine rich transmembrane protein
A3-16-all-fractions_k255_415446_22
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24391..24900
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036347AE
Uncharacterized protein {ECO:0000313|EMBL:KGF78279.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
conserved hypothetical protein
A3-16-all-fractions_k255_415446_23
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24969..25745
DNA (777bp) protein (259aa)
dehydrogenase n=1 Tax=Massilia niastensis RepID=UPI00037E418E
Dehydrogenase {ECO:0000313|EMBL:KGF79284.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
short chain dehydrogenase family protein
Displaying 23 items

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