ggKbase home page

A3-16-all-fractions_k255_534329

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_534329_1
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..762
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037489D1
Uncharacterized protein {ECO:0000313|EMBL:KHA80135.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
transmembrane protein
A3-16-all-fractions_k255_534329_2
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

772..1299
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003773289
Uncharacterized protein {ECO:0000313|EMBL:KFI06681.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
RDD family protein
A3-16-all-fractions_k255_534329_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1301..1813)
DNA (513bp) protein (171aa)
thioredoxin n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002F82947
Thioredoxin {ECO:0000313|EMBL:KGF82529.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
redoxin
A3-16-all-fractions_k255_534329_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1824..2534)
DNA (711bp) protein (237aa)
Cytochrome c biogenesis protein transmembrane region n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WJU1_BURSC
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KGF82530.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
cytochrome C biogenesis protein transmembrane region
A3-16-all-fractions_k255_534329_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2707..3450
DNA (744bp) protein (248aa)
chemotaxis protein CheY n=1 Tax=Massilia niastensis RepID=UPI00037C094A
Chemotaxis protein CheY {ECO:0000313|EMBL:KGF82531.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_534329_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3447..4757
DNA (1311bp) protein (437aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036B8EB5
integral membrane sensor signal transduction histidine kinase
A3-16-all-fractions_k255_534329_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4879..5604)
DNA (726bp) protein (242aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000367501A
RNA-binding protein S4 {ECO:0000313|EMBL:KGF82537.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
S4 domain protein
A3-16-all-fractions_k255_534329_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5601..6635)
DNA (1035bp) protein (345aa)
threonine aldolase (EC:4.1.2.5)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DCZ2_9BURK
Threonine aldolase {ECO:0000313|EMBL:KGF82538.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_534329_9
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6643..7566)
DNA (924bp) protein (308aa)
methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DE79_9BURK
SAM-dependent methyltransferase {ECO:0000313|EMBL:KGF82539.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_534329_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7553..7747)
DNA (195bp) protein (65aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035E91B5
Uncharacterized protein {ECO:0000313|EMBL:KGF82540.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
iscX; feS assembly protein IscX
A3-16-all-fractions_k255_534329_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7765..8103)
DNA (339bp) protein (113aa)
2Fe-2S ferredoxin n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DV47_9BURK
2Fe-2S ferredoxin {ECO:0000313|EMBL:KGF82541.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ferredoxin, 2Fe-2S type
A3-16-all-fractions_k255_534329_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8236..10125)
DNA (1890bp) protein (630aa)
Chaperone protein HscA homolog n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DGZ3_9BURK
Chaperone protein HscA homolog {ECO:0000256|HAMAP-Rule:MF_00679}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hscA; fe-S protein assembly chaperone HscA
A3-16-all-fractions_k255_534329_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10270..10785)
DNA (516bp) protein (172aa)
CoA-transferase n=1 Tax=Massilia niastensis RepID=UPI00036C9539
Co-chaperone protein HscB homolog {ECO:0000256|HAMAP-Rule:MF_00682}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hscB; fe-S protein assembly co-chaperone HscB
A3-16-all-fractions_k255_534329_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10801..11124)
DNA (324bp) protein (108aa)
heme biosynthesis protein HemY n=1 Tax=Massilia niastensis RepID=UPI0003791DD0
Iron-sulfur cluster assembly protein {ECO:0000313|EMBL:KGF82544.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
iscA; factor involved in Fe-S cluster assembly and activation
A3-16-all-fractions_k255_534329_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11253..11651)
DNA (399bp) protein (133aa)
FeS cluster assembly scaffold protein n=4 Tax=Burkholderiaceae RepID=B3R4B3_CUPTR
Scaffolding protein {ECO:0000313|EMBL:KGF82545.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
iscU; scaffold protein
A3-16-all-fractions_k255_534329_16
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11691..12947)
DNA (1257bp) protein (419aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
iscS; cysteine desulfurase (EC:4.4.1.-)
cysteine desulfurase n=1 Tax=Massilia niastensis RepID=UPI00035C4FEC
A3-16-all-fractions_k255_534329_17
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12947..13405)
DNA (459bp) protein (153aa)
DNA-binding protein n=1 Tax=Massilia niastensis RepID=UPI00036730CD
Iron-sulfur cluster assembly transcription factor IscR {ECO:0000313|EMBL:KFC66616.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
rrf2 family protein
A3-16-all-fractions_k255_534329_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13746..14528)
DNA (783bp) protein (261aa)
ung; uracil DNA glycosylase (EC:3.2.2.-)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DZ95_9BURK
Uracil-DNA glycosylase {ECO:0000313|EMBL:KGF82547.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_534329_19
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14707..15165
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000367335C
Uncharacterized protein {ECO:0000313|EMBL:KGF82548.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_534329_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15219..15863)
DNA (645bp) protein (215aa)
maiA; maleylacetoacetate isomerase (EC:5.2.1.2)
Maleylacetoacetate isomerase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DV40_9BURK
Maleylacetoacetate isomerase {ECO:0000313|EMBL:KGF82549.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_534329_21
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15860..16885)
DNA (1026bp) protein (342aa)
2-keto-4-pentenoate hydratase n=1 Tax=Massilia niastensis RepID=UPI00037EFF83
2-keto-4-pentenoate hydratase {ECO:0000313|EMBL:KGF82550.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
fumarylacetoacetate hydrolase family protein
A3-16-all-fractions_k255_534329_22
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16981..17988
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DZ90_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:KGF82551.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
bacterial regulatory helix-turn-helix , lysR family protein
A3-16-all-fractions_k255_534329_23
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18022..18594
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DCY3_9BURK
Gamma-glutamyl cyclotransferase {ECO:0000313|EMBL:KGF82552.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
AIG2-like family protein
A3-16-all-fractions_k255_534329_24
unknown

Not on your lists

18845..18916
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 24 items

View Taxonomy