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A3-16-all-fractions_k255_541508

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_541508_1
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..183)
DNA (183bp) protein (61aa)
transposase n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036940A8
transposase, Mutator family protein
Transposase mutator type {ECO:0000313|EMBL:EIM94544.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
A3-16-all-fractions_k255_541508_2
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(267..1079)
DNA (813bp) protein (271aa)
Band 7 protein n=1 Tax=Methylotenera mobilis (strain JLW8 / ATCC BAA-1282 / DSM 17540) RepID=C6WU38_METML
HflC protein {ECO:0000313|EMBL:KGM40767.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
hypothetical protein
A3-16-all-fractions_k255_541508_3
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1262..2125)
DNA (864bp) protein (288aa)
NmrA family protein n=1 Tax=Methylobacterium sp. GXF4 RepID=I9X1S6_9RHIZ
NmrA family protein {ECO:0000313|EMBL:EIZ86896.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
hypothetical protein
A3-16-all-fractions_k255_541508_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2248..3141
DNA (894bp) protein (298aa)
Transcriptional regulator n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P913_9DELT
LysR family transcriptional regulator {ECO:0000313|EMBL:KGF78209.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
LysR family transcriptional regulator
A3-16-all-fractions_k255_541508_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3151..3894)
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003638E43
Uncharacterized protein {ECO:0000313|EMBL:KGF78294.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative uncharacterized domain protein
A3-16-all-fractions_k255_541508_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3943..4593)
DNA (651bp) protein (217aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9TPV4_RICCO
Uncharacterized protein {ECO:0000313|EMBL:KGF78295.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_541508_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4752..5225)
DNA (474bp) protein (158aa)
Transcriptional regulator, MarR family n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IUD5_BORPD
MarR family transcriptional regulator {ECO:0000313|EMBL:KGF78296.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
MarR family transcriptional regulator
A3-16-all-fractions_k255_541508_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5307..6899)
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003610455
Uncharacterized protein {ECO:0000313|EMBL:KGF78297.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
diguanylate cyclase
A3-16-all-fractions_k255_541508_9
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7037..8824)
DNA (1788bp) protein (596aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DI74_9BURK
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKU83001.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
PAS/PAC sensor-containing diguanylate cyclase
A3-16-all-fractions_k255_541508_10
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9160..9681
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003655225
Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS-like protein {ECO:0000313|EMBL:KFC61541.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
ferredoxin
A3-16-all-fractions_k255_541508_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9678..10700
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D6M6_9BURK
FAD-binding molybdopterin dehydrogenase {ECO:0000313|EMBL:KGF78572.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
aerobic-type carbon monoxide dehydrogenase
A3-16-all-fractions_k255_541508_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10697..12985
DNA (2289bp) protein (763aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DM80_9BURK
Aldehyde oxidase {ECO:0000313|EMBL:KGF78573.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hydroxylase large subunit
A3-16-all-fractions_k255_541508_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13492..14292)
DNA (801bp) protein (267aa)
Zn-dependent hydrolase-like protein n=1 Tax=Aeromonas diversa 2478-85 RepID=N9VAW6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGF78575.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_541508_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14383..15372
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00037D8F6D
AraC family transcriptional regulator {ECO:0000313|EMBL:KGF78576.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain
A3-16-all-fractions_k255_541508_15
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15466..18039)
DNA (2574bp) protein (858aa)
Chemotaxis protein methyltransferase CheR {ECO:0000313|EMBL:CCU64024.1}; EC=2.1.1.80 {ECO:0000313|EMBL:CCU64024.1};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
Chemotaxis protein methyltransferase CheR n=1 Tax=Nitrosospira sp. APG3 RepID=M5DLX0_9PROT
PAS/PAC sensor hybrid histidine kinase
A3-16-all-fractions_k255_541508_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18202..19002
DNA (801bp) protein (267aa)
Alpha/beta hydrolase fold n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0U970_METS4
Uncharacterized protein {ECO:0000313|EMBL:KGF78583.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
alpha/beta hydrolase fold protein
A3-16-all-fractions_k255_541508_17
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19025..19720
DNA (696bp) protein (232aa)
Acetyltransferase {ECO:0000313|EMBL:KGF78584.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
acetyltransferase id=5079609 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylibium petroleiphilum genus=Methylibium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
acetyltransferase
A3-16-all-fractions_k255_541508_18
Burkholderia gladioli, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19699..20061)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LR63_BURGS
citrate transporter family protein
Citrate transporter family protein {ECO:0000313|EMBL:AJW94102.1}; TaxID=28095 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia gladioli (Pseudomonas marginata) (Phytomonas marginata).;"
A3-16-all-fractions_k255_541508_19
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20025..20600)
DNA (576bp) protein (192aa)
Putative transporter n=1 Tax=Burkholderia multivorans CGD1 RepID=B9B2W1_9BURK
Transporter {ECO:0000313|EMBL:KGF78587.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
citrate transporter family protein
A3-16-all-fractions_k255_541508_20
GWC1_Azotobacter_66_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20630..20839
DNA (210bp) protein (70aa)
Tax=GWC1_Azotobacter_66_9_curated
A3-16-all-fractions_k255_541508_21
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20906..21292)
DNA (387bp) protein (129aa)
IS605 OrfB family transposase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DWF2_9BURK
IS605 OrfB family transposase {ECO:0000313|EMBL:KFC74456.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
Transposase, IS605 OrfB family
Displaying 21 items

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