ggKbase home page

A3-16-all-fractions_k255_1981507

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_1981507_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000366D2EE
Twitching motility protein {ECO:0000313|EMBL:KGF80046.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_1981507_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

357..3020
DNA (2664bp) protein (888aa)
Glucan 1,4-alpha-glucosidase n=1 Tax=Asticcacaulis sp. AC460 RepID=V4RIW5_9CAUL
Glucan 1,4-alpha-glucosidase {ECO:0000313|EMBL:KGF80047.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
glucan 1,4-beta-glucosidase
A3-16-all-fractions_k255_1981507_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3323..4087
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003707177
Uncharacterized protein {ECO:0000313|EMBL:KGF80048.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative uncharacterized domain protein
A3-16-all-fractions_k255_1981507_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4117..6414)
DNA (2298bp) protein (766aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035DCE03
TonB-dependent receptor {ECO:0000313|EMBL:KGF80049.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
TonB-dependent receptor protein
A3-16-all-fractions_k255_1981507_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6422..6916)
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00037C32E7
Uncharacterized protein {ECO:0000313|EMBL:KGF80050.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
nuclear export factor GLE1
A3-16-all-fractions_k255_1981507_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6928..7371)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037C565A
Membrane protein {ECO:0000313|EMBL:KGF80051.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_1981507_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7425..7817)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Janthinobacterium lividum RepID=UPI0002886A84
Uncharacterized protein {ECO:0000313|EMBL:KGF80052.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_1981507_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7903..8445)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D8E7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF80053.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
yaeQ family protein
A3-16-all-fractions_k255_1981507_9
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8471..9337)
DNA (867bp) protein (289aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
purU; formyltetrahydrofolate deformylase (EC:3.5.1.10)
formyltetrahydrofolate deformylase n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036BBED6
A3-16-all-fractions_k255_1981507_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9432..10469
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DP02_9BURK
NADP-dependent oxidoreductase {ECO:0000313|EMBL:KGF80055.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
zinc-binding dehydrogenase family protein
A3-16-all-fractions_k255_1981507_11
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

10572..10928
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Ricinus communis RepID=B9T9K8_RICCO
Putative uncharacterized protein {ECO:0000313|EMBL:EEF27454.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
putative uncharacterized protein
A3-16-all-fractions_k255_1981507_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11091..11612
DNA (522bp) protein (174aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Ricinus communis RepID=B9T9K7_RICCO
Metal-dependent hydrolase {ECO:0000313|EMBL:KGF80056.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
conserved hypothetical protein
A3-16-all-fractions_k255_1981507_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11821..13071
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DNZ7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF80057.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_1981507_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13073..13513
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003722D53
Uncharacterized protein {ECO:0000313|EMBL:KGF80058.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_1981507_15
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13510..16251
DNA (2742bp) protein (914aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000372291F
Signaling protein {ECO:0000313|EMBL:KFI06450.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
diguanylate cyclase
A3-16-all-fractions_k255_1981507_16
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16248..17342
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037B8FCD
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EKU80504.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
diguanylate cyclase
A3-16-all-fractions_k255_1981507_17
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17339..17893)
DNA (555bp) protein (185aa)
TIGR00730 family protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DNZ1_9BURK
DNA-binding protein {ECO:0000313|EMBL:KGF80063.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
possible lysine decarboxylase family protein
A3-16-all-fractions_k255_1981507_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17901..18578)
DNA (678bp) protein (226aa)
TetR family transcriptional regulator n=1 Tax=Massilia niastensis RepID=UPI00037BE8AF
TetR family transcriptional regulator {ECO:0000313|EMBL:KGF80064.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
bacterial regulatory s, tetR family protein
A3-16-all-fractions_k255_1981507_19
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18645..19577)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D786_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU80499.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
PGAP1-like family protein
A3-16-all-fractions_k255_1981507_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19582..21216)
DNA (1635bp) protein (545aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035D6EA1
GMC family oxidoreductase {ECO:0000313|EMBL:KGF80065.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
glucose-methanol-choline oxidoreductase
A3-16-all-fractions_k255_1981507_21
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21213..21734)
DNA (522bp) protein (174aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000377998E
Uncharacterized protein {ECO:0000313|EMBL:KGF80066.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_1981507_22
Nitrosomonas sp. Is79A3, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21939..22982
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003717761
RHS repeat-associated core domain-containing protein
RHS repeat-associated core domain-containing protein {ECO:0000313|EMBL:AEJ03049.1}; TaxID=261292 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomonas sp. (strain Is79A3).;"
A3-16-all-fractions_k255_1981507_23
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23140..23898)
DNA (759bp) protein (253aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256|RuleBase:RU362024}; tRNA Cm32/Um32 methyltransferase {ECO:0000256|RuleBase:RU362024}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036B88F8
putative methyltransferase
A3-16-all-fractions_k255_1981507_24
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24060..24848
DNA (789bp) protein (263aa)
inositol monophosphatase n=1 Tax=Massilia niastensis RepID=UPI00037E2EE9
Inositol monophosphatase {ECO:0000313|EMBL:KGF80068.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
inositol monophosphatase family protein
A3-16-all-fractions_k255_1981507_25
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25211..26659
DNA (1449bp) protein (483aa)
ATP-dependent RNA helicase RhlE {ECO:0000256|HAMAP-Rule:MF_00968}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00968};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
rhlE; ATP-dependent RNA helicase (EC:3.-.-.-)
ATP-dependent RNA helicase RhlE n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D782_9BURK
A3-16-all-fractions_k255_1981507_26
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26813..27262
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003740985
Transcriptional regulator MarR family protein {ECO:0000313|EMBL:KFC62581.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
MarR family transcriptional regulator
A3-16-all-fractions_k255_1981507_27
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27345..28118
DNA (774bp) protein (258aa)
Hydroxypyruvate isomerase {ECO:0000256|PIRNR:PIRNR006241}; EC=5.3.1.22 {ECO:0000256|PIRNR:PIRNR006241};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hyi; hydroxypyruvate isomerase (EC:5.3.1.22)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI000370FB7D
A3-16-all-fractions_k255_1981507_28
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28204..29055
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DLD4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF80072.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative lipoprotein
A3-16-all-fractions_k255_1981507_29
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29073..29618
DNA (546bp) protein (182aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036D4B1E
Uncharacterized protein {ECO:0000313|EMBL:KFI06433.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
A3-16-all-fractions_k255_1981507_30
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29855..30211
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037E0C8D
TraR/DksA family transcriptional regulator {ECO:0000313|EMBL:KGF80073.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
prokaryotic dksA/traR C4-type zinc finger family protein
Displaying items 1-30 of 55 in total

View Taxonomy