ggKbase home page

A3-16-all-fractions_k255_4637246

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_4637246_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..630
DNA (630bp) protein (210aa)
polA; DNA polymerase I protein (EC:2.7.7.7)
DNA polymerase I n=1 Tax=Massilia niastensis RepID=UPI00037FA07E
DNA polymerase I {ECO:0000313|EMBL:KGF80756.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_4637246_2
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

887..1972
DNA (1086bp) protein (362aa)
Type VI secretion system Vgr family protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DE47_9BURK
Type VI secretion system Vgr family protein {ECO:0000313|EMBL:EKU82939.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
rhs element Vgr family protein
A3-16-all-fractions_k255_4637246_3
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1923..2708
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DZU2_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU84172.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
conserved hypothethical protein
A3-16-all-fractions_k255_4637246_4
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2726..4204
DNA (1479bp) protein (493aa)
Uncharacterized protein n=1 Tax=Ralstonia solanacearum CMR15 RepID=D8NEU9_RALSL
conserved exported protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBJ41084.1}; TaxID=859655 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia solanacearum CMR15.;"
A3-16-all-fractions_k255_4637246_5
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4216..4479
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Janthinobacterium lividum RepID=UPI0002884D13
Uncharacterized protein {ECO:0000313|EMBL:EKU84174.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
RSp0204; hypothetical protein
A3-16-all-fractions_k255_4637246_6
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4493..4954
DNA (462bp) protein (154aa)
virulence factor, pectin lyase fold; protein n=1 Tax=Ralstonia solanacearum RepID=UPI00035D79B0
Virulence factor {ECO:0000313|EMBL:KDV24999.1}; TaxID=1395570 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia JBK9.;"
hypothetical protein
A3-16-all-fractions_k255_4637246_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5234..6025)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003645821
Alpha/beta hydrolase {ECO:0000313|EMBL:KGF80757.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
lipolytic protein
A3-16-all-fractions_k255_4637246_8
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6258..7475
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036ECCEE
Uncharacterized protein {ECO:0000313|EMBL:KFI07406.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
hypothetical protein
A3-16-all-fractions_k255_4637246_9
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7558..8373
DNA (816bp) protein (272aa)
carboxymethylenebutenolidase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E8AE56
tat (twin-arginine translocation) pathway signal sequence domain protein
Tat (Twin-arginine translocation) pathway signal sequence domain protein {ECO:0000313|EMBL:CDG85171.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
A3-16-all-fractions_k255_4637246_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8650..9375
DNA (726bp) protein (242aa)
divalent cation transporter n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000375B3F5
Divalent cation transporter {ECO:0000313|EMBL:KGF82786.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
Zinc transporter
A3-16-all-fractions_k255_4637246_11
unknown

Not on your lists

9478..9621
DNA (144bp) protein (48aa)

This feature has no annotations

A3-16-all-fractions_k255_4637246_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9675..10538)
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DRJ7_9BURK
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
rhodanese-like domain protein
A3-16-all-fractions_k255_4637246_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10547..11443)
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003752B2F
Membrane protein {ECO:0000313|EMBL:KGF82784.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
conserved hypothetical protein
A3-16-all-fractions_k255_4637246_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11472..12587)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D9F3_9BURK
Rieske (2Fe-2S) protein {ECO:0000313|EMBL:KGF82783.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
rieske [2Fe-2S] domain protein
A3-16-all-fractions_k255_4637246_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13053..13358
DNA (306bp) protein (102aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
xseB; exodeoxyribonuclease VII, small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PM29_9BURK
A3-16-all-fractions_k255_4637246_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13355..14251
DNA (897bp) protein (299aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000373DEAA
Geranyl transferase {ECO:0000313|EMBL:KGF82781.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
polyprenyl synthetase family protein
A3-16-all-fractions_k255_4637246_17
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14252..16120
DNA (1869bp) protein (623aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Massilia niastensis RepID=UPI0003653E18
A3-16-all-fractions_k255_4637246_18
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16341..18257
DNA (1917bp) protein (639aa)
PAS domain S-box protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DH76_9BURK
PAS domain S-box protein {ECO:0000313|EMBL:EKU82651.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
multi-sensor hybrid histidine kinase
A3-16-all-fractions_k255_4637246_19
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(18309..19349)
DNA (1041bp) protein (347aa)
Rhomboid family protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNV7_OPITP
rhomboid family protein
Rhomboid family protein {ECO:0000313|EMBL:ACB75477.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
A3-16-all-fractions_k255_4637246_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19360..19914)
DNA (555bp) protein (185aa)
ATP--cobalamin adenosyltransferase n=1 Tax=Massilia niastensis RepID=UPI0003684F78
ATP--cobalamin adenosyltransferase {ECO:0000313|EMBL:KGF82778.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ATP:cob(I)alamin adenosyltransferase, putative
A3-16-all-fractions_k255_4637246_21
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19985..21466
DNA (1482bp) protein (494aa)
FAD-binding protein n=1 Tax=Massilia niastensis RepID=UPI00036F9145
Glycolate oxidase subunit GlcD {ECO:0000313|EMBL:KGF82777.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
FAD linked oxidases, C-terminal domain protein
A3-16-all-fractions_k255_4637246_22
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21468..22532
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000369705C
Glycolate oxidase {ECO:0000313|EMBL:KGF82776.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
FAD binding domain protein
A3-16-all-fractions_k255_4637246_23
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22536..23771
DNA (1236bp) protein (412aa)
glcF; glycolate oxidase iron-sulfur subunit (EC:1.1.3.15)
glycolate oxidase n=1 Tax=Massilia niastensis RepID=UPI00037156DB
Glycolate oxidase iron-sulfur subunit {ECO:0000256|PIRNR:PIRNR000139}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_4637246_24
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23800..24126
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035CECE8
Uncharacterized protein {ECO:0000313|EMBL:KGF82773.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_4637246_25
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24132..24821
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DUW1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF82772.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_4637246_26
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24818..25771)
DNA (954bp) protein (318aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter fuscus DSM 2262.;"
Periplasmic sensor hybrid histidine kinase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9NU16_9DELT
multi-sensor hybrid histidine kinase
A3-16-all-fractions_k255_4637246_27
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25794..26663
DNA (870bp) protein (290aa)
RND transporter n=1 Tax=Pseudomonas fuscovaginae RepID=UPI000289C5BA
RND transporter {ECO:0000313|EMBL:AJQ47529.1}; TaxID=1384061 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida S13.1.2.;"
transporter
A3-16-all-fractions_k255_4637246_28
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27852..28850
DNA (999bp) protein (333aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00036D8A3F
Uncharacterized protein {ECO:0000313|EMBL:KGF82761.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_4637246_29
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28869..29351)
DNA (483bp) protein (161aa)
bsaA; glutathione peroxidase (EC:1.11.1.9)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036186B9
Glutathione peroxidase {ECO:0000256|RuleBase:RU000499}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_4637246_30
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29413..29844
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF161 RepID=S6ILI5_9PSED
Uncharacterized protein {ECO:0000313|EMBL:KGF82759.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
Displaying items 1-30 of 32 in total

View Taxonomy