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A3-16-all-fractions_k255_4979652

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Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_4979652_1
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

52..1029
DNA (978bp) protein (326aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
rpoA; DNA-directed RNA polymerase, alpha subunit (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E028_9BURK
A3-16-all-fractions_k255_4979652_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1152..1547
DNA (396bp) protein (132aa)
50S ribosomal protein L17 n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DLW7_9BURK
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
rplQ; 50S ribosomal protein L17
A3-16-all-fractions_k255_4979652_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1658..3514
DNA (1857bp) protein (619aa)
Thiol:disulfide interchange protein DsbD {ECO:0000256|HAMAP-Rule:MF_00399}; EC=1.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00399};; Protein-disulfide reductase {ECO:0000256|HAMAP-Rule:MF_00399}; Flags: Precursor;; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
dsbD; cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC:1.8.1.8)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036D3600
A3-16-all-fractions_k255_4979652_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3561..4070)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003745C89
Uncharacterized protein {ECO:0000313|EMBL:KGF78870.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_4979652_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4299..5027
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DIW5_9BURK
Transcriptional regulator {ECO:0000313|EMBL:KGF78869.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
response regulator
A3-16-all-fractions_k255_4979652_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5024..6391
DNA (1368bp) protein (456aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003776AC2
HAMP domain protein
A3-16-all-fractions_k255_4979652_7
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6621..7802
DNA (1182bp) protein (394aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DLW1_9BURK
RND transporter {ECO:0000313|EMBL:KFI08046.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
efflux transporter, RND family, MFP subunit
A3-16-all-fractions_k255_4979652_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7808..10936
DNA (3129bp) protein (1043aa)
multidrug transporter n=1 Tax=Janthinobacterium lividum RepID=UPI000287CA8F
Acriflavine resistance protein B {ECO:0000313|EMBL:KGF78867.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
acrB/AcrD/AcrF family protein
A3-16-all-fractions_k255_4979652_9
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11279..12154
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037A1003
Uncharacterized protein {ECO:0000313|EMBL:KGF78866.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative uncharacterized protein
A3-16-all-fractions_k255_4979652_10
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12175..12837)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PK00_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELX11731.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
hypothetical protein
A3-16-all-fractions_k255_4979652_11
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12951..14213)
DNA (1263bp) protein (421aa)
Major facilitator superfamily protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P4Y4_AZOS1
major facilitator superfamily protein
Major facilitator superfamily protein {ECO:0000313|EMBL:BAI75713.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
A3-16-all-fractions_k255_4979652_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14314..15327)
DNA (1014bp) protein (338aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
delta-aminolevulinic acid dehydratase n=1 Tax=Massilia niastensis RepID=UPI00036885B2
delta-aminolevulinic acid dehydratase family protein
A3-16-all-fractions_k255_4979652_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15352..16047)
DNA (696bp) protein (232aa)
GTP-binding protein EngB n=1 Tax=Massilia niastensis RepID=UPI0003802053
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
GTPase of unknown function family protein
A3-16-all-fractions_k255_4979652_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16291..16974
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003724A50
Cytochrome C {ECO:0000313|EMBL:KGF78861.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
cytochrome c family protein
A3-16-all-fractions_k255_4979652_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17357..19450
DNA (2094bp) protein (698aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000367BFEA
Cytochrome C biogenesis protein ResB {ECO:0000313|EMBL:KGF78860.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
resB-like family protein
A3-16-all-fractions_k255_4979652_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19480..20646
DNA (1167bp) protein (389aa)
cytochrome C biogenesis protein n=1 Tax=Massilia niastensis RepID=UPI00037DF013
Cytochrome C biogenesis protein {ECO:0000313|EMBL:KGF78859.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
cytochrome c assembly family protein
A3-16-all-fractions_k255_4979652_17
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20784..21761
DNA (978bp) protein (326aa)
Sulfoxide reductase catalytic subunit YedY {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016472}; EC=1.8.-.- {ECO:0000256|HAMAP-Rule:MF_01206, ECO:0000256|SAAS:SAAS00016459};; Flags: Precursor;; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
sulfoxide reductase catalytic subunit YedY n=1 Tax=Massilia niastensis RepID=UPI000378AD5F
tat (twin-arginine translocation) pathway signal sequence domain protein
A3-16-all-fractions_k255_4979652_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21773..22429
DNA (657bp) protein (219aa)
Sulfoxide reductase heme-binding subunit YedZ n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PKS4_9BURK
Sulfoxide reductase heme-binding subunit YedZ {ECO:0000256|HAMAP-Rule:MF_01207, ECO:0000256|SAAS:SAAS00016679}; Flavocytochrome YedZ {ECO:0000256|HAMAP-Rule:MF_01207}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ferric reductase like transmembrane component family protein
A3-16-all-fractions_k255_4979652_19
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22458..22640
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF78856.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_4979652_20
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22664..24520)
DNA (1857bp) protein (619aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003768143
Uncharacterized protein {ECO:0000313|EMBL:KFI07187.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
putative membrane protein
A3-16-all-fractions_k255_4979652_21
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24580..25854)
DNA (1275bp) protein (425aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000369DC03
A3-16-all-fractions_k255_4979652_22
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25871..26155)
DNA (285bp) protein (95aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF78854.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_4979652_23
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26185..26514
DNA (330bp) protein (110aa)
Protein CyaY n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E490_9BURK
Protein CyaY {ECO:0000256|HAMAP-Rule:MF_00142, ECO:0000256|SAAS:SAAS00020372}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
cyaY; iron donor protein CyaY
A3-16-all-fractions_k255_4979652_24
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26506..28860)
DNA (2355bp) protein (785aa)
mrcA; mrcA; penicillin-binding 1 (Peptidoglycan synthetase) transmembrane protein (EC:2.4.2.-)
penicillin-binding protein 1A n=1 Tax=Massilia niastensis RepID=UPI00037678B6
Penicillin-binding protein {ECO:0000313|EMBL:KGF78852.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_4979652_25
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29180..30253
DNA (1074bp) protein (358aa)
Type IV pilus assembly protein PilM n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DIV1_9BURK
Pilus assembly protein PilM {ECO:0000313|EMBL:KGF78851.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
membrane protein ComM
A3-16-all-fractions_k255_4979652_26
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30253..30876
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035F437B
Fimbrial assembly protein {ECO:0000313|EMBL:KGF78850.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
fimbrial assembly family protein
A3-16-all-fractions_k255_4979652_27
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30873..31562
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003633D96
Pilus assembly protein PilO {ECO:0000313|EMBL:KGF78849.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
pilus assembly , PilO family protein
A3-16-all-fractions_k255_4979652_28
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31559..32098
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037E69EA
Pilus assembly protein PilP {ECO:0000313|EMBL:KGF78848.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
pilus assembly , PilP family protein
A3-16-all-fractions_k255_4979652_29
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32095..34254
DNA (2160bp) protein (720aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003761BD7
Secretin {ECO:0000313|EMBL:KGF78847.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
pilQ; type IV pilus secretin PilQ family protein
A3-16-all-fractions_k255_4979652_30
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34289..36295
DNA (2007bp) protein (669aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E000_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF78846.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
bacterial Ig-like domain family protein
Displaying items 1-30 of 42 in total

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