ggKbase home page

A3-16-all-fractions_k255_5045868

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_5045868_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..328)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000362765A
LysR family transcriptional regulator {ECO:0000313|EMBL:KGF82621.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
xapR; HTH-type transcriptional regulator xapR
A3-16-all-fractions_k255_5045868_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(346..1266)
DNA (921bp) protein (307aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
pseudouridine-5''''-phosphate glycosidase n=1 Tax=Massilia niastensis RepID=UPI0003712E19
indigoidine synthase A like family protein
A3-16-all-fractions_k255_5045868_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1269..2432)
DNA (1164bp) protein (388aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000377346F
Pseudouridine-5'-phosphate glycosidase {ECO:0000313|EMBL:KGF82619.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
pfkB carbohydrate kinase family protein
A3-16-all-fractions_k255_5045868_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2570..3421
DNA (852bp) protein (284aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
xapA; xanthosine phosphorylase (EC:2.4.2.1)
purine nucleoside phosphorylase n=1 Tax=Massilia niastensis RepID=UPI000363A164
A3-16-all-fractions_k255_5045868_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3440..4633
DNA (1194bp) protein (398aa)
Phosphopentomutase {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00010015}; EC=5.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00740, ECO:0000256|SAAS:SAAS00009998};; Phosphodeoxyribomutase {ECO:0000256|HAMAP-Rule:MF_00740}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
deoB; phosphopentomutase (EC:5.4.2.7)
phosphopentomutase n=1 Tax=Massilia niastensis RepID=UPI00035F8B58
A3-16-all-fractions_k255_5045868_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4630..5586
DNA (957bp) protein (319aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
deoxyribose-phosphate aldolase n=1 Tax=Massilia niastensis RepID=UPI00037CB60D
A3-16-all-fractions_k255_5045868_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5632..7980
DNA (2349bp) protein (783aa)
aldehyde dehydrogenase n=1 Tax=Massilia niastensis RepID=UPI00035E859D
Aldehyde dehydrogenase {ECO:0000313|EMBL:KGF82615.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
aldehyde dehydrogenase family protein
A3-16-all-fractions_k255_5045868_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8140..9462
DNA (1323bp) protein (441aa)
Thymidine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01628, ECO:0000256|SAAS:SAAS00031984}; EC=2.4.2.4 {ECO:0000256|HAMAP-Rule:MF_01628, ECO:0000256|SAAS:SAAS00031985};; TdRPase {ECO:0000256|HAMAP-Rule:MF_01628}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
deoA; thymidine phosphorylase (EC:2.4.2.4)
thymidine phosphorylase n=1 Tax=Massilia niastensis RepID=UPI00037F5395
A3-16-all-fractions_k255_5045868_9
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9459..9863
DNA (405bp) protein (135aa)
cdd; cytidine deaminase (EC:3.5.4.5)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037D5422
Cytidine deaminase {ECO:0000313|EMBL:KGF82613.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_5045868_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9981..10727
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DA26_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF82612.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
periplasmic ligand-binding sensor protein
A3-16-all-fractions_k255_5045868_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10741..11175)
DNA (435bp) protein (145aa)
glyoxalase n=1 Tax=Halomonas sp. KM-1 RepID=UPI000288AFD3
Glyoxalase {ECO:0000313|EMBL:KGF82611.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
glyoxalase/Bleomycin resistance/Dioxygenase superfamily protein
A3-16-all-fractions_k255_5045868_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11226..12023)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00035EAA0E
Transcriptional regulator {ECO:0000313|EMBL:KGF82610.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
two-component response regulator transcription protein
A3-16-all-fractions_k255_5045868_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12026..12916)
DNA (891bp) protein (297aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
transmembrane sensor histidine kinase transcription regulator protein (EC:2.7.3.-)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037221B7
A3-16-all-fractions_k255_5045868_14
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12930..13196)
DNA (267bp) protein (89aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI000367474F
Uncharacterized protein {ECO:0000313|EMBL:KFC69856.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
A3-16-all-fractions_k255_5045868_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13370..14062
DNA (693bp) protein (231aa)
Helix-turn-helix type 11 domain protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PHU4_9BURK
DNA-binding protein {ECO:0000313|EMBL:KGF82608.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
HTH domain protein
A3-16-all-fractions_k255_5045868_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14124..14741
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI0003728001
Glutathione S-transferase {ECO:0000313|EMBL:KGF82607.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
glutathione S-transferase, C-terminal domain protein
A3-16-all-fractions_k255_5045868_17
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14749..15300)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00038074FD
GCN5 family acetyltransferase {ECO:0000313|EMBL:KGF82606.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative N-acetyltransferase
A3-16-all-fractions_k255_5045868_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15288..15938)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003750042
TetR family transcriptional regulator {ECO:0000313|EMBL:KGF82789.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
bacterial regulatory s, tetR family protein
A3-16-all-fractions_k255_5045868_19
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15935..17377)
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036ABA54
GntR family transcriptional regulator {ECO:0000313|EMBL:KGF82605.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
bacterial regulatory s, gntR family protein
A3-16-all-fractions_k255_5045868_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17562..18878
DNA (1317bp) protein (439aa)
Omega amino acid--pyruvate aminotransferase {ECO:0000313|EMBL:KGF82604.1}; EC=2.6.1.18 {ECO:0000313|EMBL:KGF82604.1};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
Omega-amino acid-pyruvate aminotransferase n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PMF4_9BURK
aminotransferase class-III family protein
A3-16-all-fractions_k255_5045868_21
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18887..20380
DNA (1494bp) protein (498aa)
mmsA; methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
methylmalonate-semialdehyde dehydrogenase n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00035F158B
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:KGF82603.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_5045868_22
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20456..21820
DNA (1365bp) protein (455aa)
dihydropyrimidine dehydrogenase subunit A n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036067B4
Dihydropyrimidine dehydrogenase {ECO:0000313|EMBL:KGF82602.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
pyridine nucleotide-disulphide oxidoreductase family protein
A3-16-all-fractions_k255_5045868_23
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21820..21897
DNA (78bp) protein (26aa)
NAD-dependent dihydropyrimidine dehydrogenase YeiA {ECO:0000313|EMBL:KFC69849.1}; EC=1.3.1.1 {ECO:0000313|EMBL:KFC69849.1};; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
dihydropyrimidine dehydrogenase subunit B n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003491790
dihydroorotate dehydrogenase family domain protein
Displaying 23 items

View Taxonomy