ggKbase home page

A3-16-all-fractions_k255_5245479

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_5245479_1

Not on your lists

comp(2..166)
DNA (165bp) protein (55aa)
transposase n=1 Tax=Duganella zoogloeoides RepID=UPI00035E35F3
Uncharacterized protein {ECO:0000313|EMBL:KKL12422.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
A3-16-all-fractions_k255_5245479_2
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

971..1219
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DCV4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFC75842.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
putative uncharacterized protein
A3-16-all-fractions_k255_5245479_3
Streptomyces sp. 769, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1858..3174)
DNA (1317bp) protein (439aa)
Transposase n=1 Tax=Streptomyces bottropensis ATCC 25435 RepID=M3EJ43_9ACTO
Transposase
Transposase {ECO:0000313|EMBL:AJC57005.1}; TaxID=1262452 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. 769.;"
A3-16-all-fractions_k255_5245479_4
Acinetobacter junii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4059..6029)
DNA (1971bp) protein (657aa)
Uncharacterized protein n=2 Tax=Acinetobacter junii RepID=N8ZNK0_ACIJU
Uncharacterized protein {ECO:0000313|EMBL:EPR87524.1}; TaxID=1330047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter junii MTCC 11364.;"
hypothetical protein
A3-16-all-fractions_k255_5245479_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6605..8188)
DNA (1584bp) protein (528aa)
Isocitrate lyase {ECO:0000313|EMBL:KGF79126.1}; EC=4.1.3.1 {ECO:0000313|EMBL:KGF79126.1};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
isocitrate lyase n=1 Tax=Massilia niastensis RepID=UPI0003714152
isocitrate lyase
A3-16-all-fractions_k255_5245479_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8648..9055)
DNA (408bp) protein (136aa)
nucleoside diphosphate kinase regulator n=1 Tax=Spongiibacter tropicus RepID=UPI0003B5DE3C
Uncharacterized protein {ECO:0000313|EMBL:KGF79134.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
GreA/GreB family elongation factor
A3-16-all-fractions_k255_5245479_7
unknown

Not on your lists

9079..9285
DNA (207bp) protein (69aa)

This feature has no annotations

A3-16-all-fractions_k255_5245479_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9615..12026)
DNA (2412bp) protein (804aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003497500
Uncharacterized protein {ECO:0000313|EMBL:KGF79129.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_5245479_9
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12067..12828)
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034CB1F1
ABC transporter permease {ECO:0000313|EMBL:KGF79130.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ABC transporter permease
A3-16-all-fractions_k255_5245479_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12825..13859)
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034A2584
Aliphatic sulfonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGF79131.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ABC transporter substrate-binding protein
A3-16-all-fractions_k255_5245479_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13900..14679)
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI000346C098
ABC transporter {ECO:0000313|EMBL:KGF79132.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
sulfonate/nitrate/taurine transport system ATP-binding protein
A3-16-all-fractions_k255_5245479_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14874..15620
DNA (747bp) protein (249aa)
Transcriptional regulator, GntR family n=1 Tax=Pseudomonas fluorescens Q2-87 RepID=J2Y3S8_PSEFL
GntR family transcriptional regulator {ECO:0000313|EMBL:KGF79133.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
GntR family transcriptional regulator
A3-16-all-fractions_k255_5245479_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15732..16166
DNA (435bp) protein (145aa)
membrane protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI0002ED95EA
Uncharacterized protein {ECO:0000313|EMBL:KGF79140.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_5245479_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16177..17082)
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036EA322
Diguanylate cyclase {ECO:0000313|EMBL:KGF79143.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
wspR2; two-component response regulator
A3-16-all-fractions_k255_5245479_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17079..20579)
DNA (3501bp) protein (1167aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000375DDA1
Uncharacterized protein {ECO:0000313|EMBL:KGF79144.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
multi-sensor hybrid histidine kinase
A3-16-all-fractions_k255_5245479_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20583..21956)
DNA (1374bp) protein (458aa)
Uncharacterized protein conserved in bacteria DUF2236 n=1 Tax=uncultured organism RepID=T1W9B9_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KGF79145.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_5245479_17

Not on your lists

comp(21953..22819)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=uncultured organism RepID=T1WBV3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:AGU11600.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
hypothetical protein
A3-16-all-fractions_k255_5245479_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22884..25139)
DNA (2256bp) protein (752aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035D0ECB
Uncharacterized protein {ECO:0000313|EMBL:KGF78499.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
TonB-dependent receptor, plug
A3-16-all-fractions_k255_5245479_19
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25417..27243
DNA (1827bp) protein (609aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035C3B88
ABC-type uncharacterized transport system, permease and ATPase component {ECO:0000313|EMBL:KFC74686.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
ABC transporter permease/ATPase
A3-16-all-fractions_k255_5245479_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27315..28556)
DNA (1242bp) protein (414aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DCP1_9BURK
Membrane protein {ECO:0000313|EMBL:KGF78500.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
conserved hypothetical protein
A3-16-all-fractions_k255_5245479_21
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30602..31063
DNA (462bp) protein (154aa)
hypothetical protein n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00036DBF47
Transposase {ECO:0000313|EMBL:KFC70566.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
hypothetical protein
A3-16-all-fractions_k255_5245479_22
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31243..32073
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000376E0F0
Transposase {ECO:0000313|EMBL:KFC70567.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
integrase catalytic subunit
A3-16-all-fractions_k255_5245479_23
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32489..32872
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036311E4
Uncharacterized protein {ECO:0000313|EMBL:CDQ10468.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrivorans.;"
istB; transpoase helper protein
A3-16-all-fractions_k255_5245479_24

Not on your lists

32841..34493
DNA (1653bp) protein (551aa)
Transposase for IS66 n=1 Tax=uncultured bacterium RepID=J9S0F1_9BACT
Transposase for IS66 {ECO:0000313|EMBL:AFR44001.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
istA; transposase
A3-16-all-fractions_k255_5245479_25
Gloeocapsa sp. PCC 73106, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

37359..37949
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Gloeocapsa sp. PCC 73106 RepID=L8LNH0_9CHRO
Uncharacterized protein {ECO:0000313|EMBL:ELR99098.1}; Flags: Precursor;; TaxID=102232 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 73106.;"
hypothetical protein
Displaying 25 items

View Taxonomy