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A3-16-all-fractions_k255_5888564

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_5888564_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(64..276)
DNA (213bp) protein (71aa)
30S ribosomal protein S21 n=3 Tax=Oxalobacteraceae RepID=G0AIS7_COLFT
rpsU; 30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_5888564_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(394..1605)
DNA (1212bp) protein (404aa)
HI0933 family flavoprotein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DEL3_9BURK
Membrane protein {ECO:0000313|EMBL:KGF80631.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
pyridine nucleotide-disulphide oxidoreductase family protein
A3-16-all-fractions_k255_5888564_3
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1668..2624)
DNA (957bp) protein (319aa)
Flavodoxin reductase family protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2KR59_9BURK
Flavodoxin reductase family protein {ECO:0000313|EMBL:EJL82600.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
ferredoxin
A3-16-all-fractions_k255_5888564_4
Herbaspirillum sp. CF444, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2676..3194
DNA (519bp) protein (173aa)
Beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family n=1 Tax=Herbaspirillum sp. CF444 RepID=J2KNZ7_9BURK
Beta-ketoadipate pathway transcriptional regulator, PcaR/PcaU/PobR family {ECO:0000313|EMBL:EJL81845.1}; Flags: Precursor;; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;"
pcaR; IclR family transcription regulator protein
A3-16-all-fractions_k255_5888564_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3203..4183)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035D3BD4
Glycosyl transferase {ECO:0000313|EMBL:KGF80630.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
glycosyl transferase family protein
A3-16-all-fractions_k255_5888564_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4303..5364
DNA (1062bp) protein (354aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54)
phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Massilia niastensis RepID=UPI00036E9017
A3-16-all-fractions_k255_5888564_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5533..6570
DNA (1038bp) protein (346aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
UGMP family protein n=1 Tax=Massilia niastensis RepID=UPI00036D094F
metalloendopeptidase, , glycoprotease family protein
A3-16-all-fractions_k255_5888564_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6659..7465)
DNA (807bp) protein (269aa)
nitrate ABC transporter ATP-binding protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003732E1D
Nitrate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGF80626.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
nitrate ABC transporter ATP-binding protein
A3-16-all-fractions_k255_5888564_9
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7468..8331)
DNA (864bp) protein (288aa)
nitrate ABC transporter permease n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036366D0
Nitrate ABC transporter permease {ECO:0000313|EMBL:KGF80625.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
nasE; nitrate ABC transporter permease
A3-16-all-fractions_k255_5888564_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8339..9571)
DNA (1233bp) protein (411aa)
nitrate transporter n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037D37AE
Nitrate transporter {ECO:0000313|EMBL:KGF80624.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
nasF; nitrate transport system substrate-binding protein
A3-16-all-fractions_k255_5888564_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9955..10800
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E154_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF80621.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_5888564_12
Massilia sp. LC238, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10892..11593)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00038137A6
DSBA oxidoreductase {ECO:0000313|EMBL:KFC64208.1}; TaxID=1502852 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. LC238.;"
DSBA-like thioredoxin domain protein
A3-16-all-fractions_k255_5888564_13
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11722..12363)
DNA (642bp) protein (214aa)
glycerol-3-phosphate acyltransferase n=1 Tax=Massilia niastensis RepID=UPI0003771511
Glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-PO4 G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Acyl-phosphate--glycerol-3-phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; G3P acyltransferase {ECO:0000256|HAMAP-Rule:MF_01043}; Lysophosphatidic acid synthase {ECO:0000256|HAMAP-Rule:MF_01043}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
conserved hypothetical protein
A3-16-all-fractions_k255_5888564_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12464..12955)
DNA (492bp) protein (164aa)
Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase {ECO:0000256|PIRNR:PIRNR006181}; EC=4.2.-.- {ECO:0000256|PIRNR:PIRNR006181};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
membrane protein n=1 Tax=Massilia niastensis RepID=UPI000370D8AB
hypothetical protein
A3-16-all-fractions_k255_5888564_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12994..13965
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036C2D77
Uncharacterized protein {ECO:0000313|EMBL:KGF80619.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
endonuclease/Exonuclease/phosphatase family protein
A3-16-all-fractions_k255_5888564_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14271..15470
DNA (1200bp) protein (400aa)
RND efflux pump membrane fusion protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PII8_9BURK
MFP transporter {ECO:0000313|EMBL:KGF80618.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
efflux transporter, RND family, MFP subunit
A3-16-all-fractions_k255_5888564_17
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15474..18566
DNA (3093bp) protein (1031aa)
nodulation protein NolG n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00036E3C1E
acrB/AcrD/AcrF family protein
AcrB/AcrD/AcrF family protein {ECO:0000313|EMBL:CDG81516.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
A3-16-all-fractions_k255_5888564_18
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18682..18864)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DEK5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFI06219.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
hypothetical protein
A3-16-all-fractions_k255_5888564_19
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18938..19843)
DNA (906bp) protein (302aa)
tyrosine recombinase XerD n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037F697A
Tyrosine recombinase XerD {ECO:0000256|HAMAP-Rule:MF_01807}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
xerD; tyrosine recombinase XerD
A3-16-all-fractions_k255_5888564_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19816..20376)
DNA (561bp) protein (187aa)
methylated-DNA-[]-cysteine S-methyltransferase family protein (EC:2.1.1.63)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI00037DF005
Cysteine methyltransferase {ECO:0000313|EMBL:KGF80616.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_5888564_21
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20782..21810)
DNA (1029bp) protein (343aa)
C4-dicarboxylate ABC transporter n=1 Tax=Janthinobacterium lividum RepID=UPI0002886C00
C4-dicarboxylate ABC transporter {ECO:0000313|EMBL:KHA79598.1}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
dctP; C4-dicarboxylate-binding periplasmic protein
A3-16-all-fractions_k255_5888564_22
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21935..23947
DNA (2013bp) protein (671aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036DE5D0
sensory box protein
A3-16-all-fractions_k255_5888564_23
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23984..24577
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DEK1_9BURK
Histidine kinase {ECO:0000313|EMBL:KGF80614.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
response regulator
A3-16-all-fractions_k255_5888564_24
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24715..25095
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DFY0_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF80613.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_5888564_25
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25099..26211)
DNA (1113bp) protein (371aa)
Epoxyqueuosine reductase {ECO:0000256|HAMAP-Rule:MF_00916}; EC=1.17.99.6 {ECO:0000256|HAMAP-Rule:MF_00916};; Queuosine biosynthesis protein QueG {ECO:0000256|HAMAP-Rule:MF_00916}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000378759C
iron-sulfur cluster binding protein, putative
A3-16-all-fractions_k255_5888564_26
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26260..26748
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036CE588
Hydrolase {ECO:0000313|EMBL:KGF80611.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
uncharacterised P-loop hydrolase UPF0079 family protein
A3-16-all-fractions_k255_5888564_27
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26712..28130
DNA (1419bp) protein (473aa)
amiC; N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
cell wall hydrolase n=1 Tax=Massilia niastensis RepID=UPI000373C325
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KGF80610.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_5888564_28
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28169..28987
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000370F698
Aldose epimerase {ECO:0000313|EMBL:KGF80609.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
aldose 1-epimerase family protein
A3-16-all-fractions_k255_5888564_29
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29110..29346
DNA (237bp) protein (79aa)
Uncharacterized protein n=3 Tax=Burkholderia multivorans RepID=B9BUK8_9BURK
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:AJX13107.1}; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
A3-16-all-fractions_k255_5888564_30
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29353..30426)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000363CB3F
Carbonate dehydratase {ECO:0000313|EMBL:KGF80607.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
eukaryotic-type carbonic anhydrase family protein
Displaying items 1-30 of 35 in total

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