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A3-16-all-fractions_k255_6260130

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_6260130_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1438
DNA (1437bp) protein (479aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III subunit alpha n=1 Tax=Massilia niastensis RepID=UPI0003736E34
A3-16-all-fractions_k255_6260130_2
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1675..2529
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DC79_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU82299.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
MltA-interacting MipA family protein
A3-16-all-fractions_k255_6260130_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2551..3411)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E1C3_9BURK
Glycosyl transferase family 2 {ECO:0000313|EMBL:KGF81834.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
glycosyl transferase 2 family protein
A3-16-all-fractions_k255_6260130_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3476..4696
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037FB574
Uncharacterized protein {ECO:0000313|EMBL:KGF81835.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
O-Antigen Polymerase family protein
A3-16-all-fractions_k255_6260130_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4689..6419
DNA (1731bp) protein (577aa)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
Lipid A export permease/ATP-binding protein MsbA n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DX47_9BURK
msbA; lipid A export permease/ATP-binding protein MsbA
A3-16-all-fractions_k255_6260130_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6431..7489
DNA (1059bp) protein (353aa)
rfaF; lipopolysaccharide heptosyltransferase II (EC:2.4.-.-)
Lipopolysaccharide heptosyltransferase II n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PIC8_9BURK
ADP-heptose--LPS heptosyltransferase {ECO:0000313|EMBL:KGF81837.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_6260130_7
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7501..8436)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PG96_9BURK
Uncharacterized protein {ECO:0000313|EMBL:ELX10612.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. HH01.;"
conserved hypothetical protein
A3-16-all-fractions_k255_6260130_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8681..10942)
DNA (2262bp) protein (754aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DG64_9BURK
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KGF81838.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_6260130_9
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11132..11368
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DES4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF81839.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_6260130_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11373..12869)
DNA (1497bp) protein (499aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036FCB3A
Uncharacterized protein {ECO:0000313|EMBL:KGF81840.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
AMP-binding enzyme family protein
A3-16-all-fractions_k255_6260130_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12952..14682
DNA (1731bp) protein (577aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
NAD-dependent formate dehydrogenase flavoprotein subunit n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q129S2_POLSJ
NADH-quinone oxidoreductase subunit F {ECO:0000313|EMBL:KGF81841.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_6260130_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14679..17474
DNA (2796bp) protein (932aa)
zinc-containing alcohol dehydrogenase (EC:1.1.1.1)
formate dehydrogenase subunit alpha n=1 Tax=Massilia niastensis RepID=UPI000375044D
Formate dehydrogenase {ECO:0000313|EMBL:KGF81842.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_6260130_13
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17471..18358
DNA (888bp) protein (296aa)
formate dehydrogenase n=1 Tax=Massilia niastensis RepID=UPI00038069BB
Formate dehydrogenase {ECO:0000313|EMBL:KFI08569.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
formate dehydrogenase subunit FdhD
A3-16-all-fractions_k255_6260130_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18355..19065
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DX53_9BURK
ABC transporter permease {ECO:0000313|EMBL:KGF81843.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
cysT; ABC-type tungstate transport system periplasmic protein
A3-16-all-fractions_k255_6260130_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19062..19793
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DG69_9BURK
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGF81844.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ABC transporter ATPase
A3-16-all-fractions_k255_6260130_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19812..20624
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DES8_9BURK
Tungsten ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGF81845.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
signal peptide
A3-16-all-fractions_k255_6260130_17
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20694..21797)
DNA (1104bp) protein (368aa)
glycosyl transferase n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI0003477F5A
Glycosyl transferase {ECO:0000313|EMBL:KGF81847.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
glycosyl transferase family protein
A3-16-all-fractions_k255_6260130_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22124..23599)
DNA (1476bp) protein (492aa)
ribonuclease, Rne/Rng family domain protein (EC:3.1.4.-)
ribonuclease n=1 Tax=Massilia niastensis RepID=UPI0003608D33
Ribonuclease G {ECO:0000313|EMBL:KGF81849.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_6260130_19
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23651..24271)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003779AFA
Maf-like protein IA69_09730 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
maf; septum formation protein Maf
A3-16-all-fractions_k255_6260130_20
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24276..24746)
DNA (471bp) protein (157aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Janthinobacterium sp. HH01 RepID=L9PG07_9BURK
conserved hypothetical protein
A3-16-all-fractions_k255_6260130_21
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24753..25475)
DNA (723bp) protein (241aa)
Ribosomal silencing factor RsfS n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E1E4_9BURK
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative uncharacterized domain protein
A3-16-all-fractions_k255_6260130_22
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25475..26146)
DNA (672bp) protein (224aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
nadD; nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037D0CD1
A3-16-all-fractions_k255_6260130_23
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26143..27054)
DNA (912bp) protein (304aa)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
Coproporphyrinogen-III oxidase, aerobic n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DX65_9BURK
coproporphyrinogen III oxidase family protein
A3-16-all-fractions_k255_6260130_24
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27816..30170
DNA (2355bp) protein (785aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037FA238
Dockerin {ECO:0000313|EMBL:KGF81855.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
celA; Neuraminidase (sialidase)
A3-16-all-fractions_k255_6260130_25
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30231..30824
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00038253FD
Uncharacterized protein {ECO:0000313|EMBL:KGF81856.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_6260130_26
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31337..33667
DNA (2331bp) protein (777aa)
Glycosyl hydrolase BNR repeat-containing protein n=1 Tax=Burkholderia ambifaria (strain MC40-6) RepID=B1YYN0_BURA4
Dockerin {ECO:0000313|EMBL:KGF79355.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
glycosyl hydrolase BNR repeat-containing glycosyl hydrolase
A3-16-all-fractions_k255_6260130_27
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

comp(33722..35452)
DNA (1731bp) protein (577aa)
Alpha-L-fucosidase id=3838017 bin=GWF2_Lentisphaerae_50_93 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
alpha-L-fucosidase
Tax=GWF2_Lentisphaerae_50_93_curated
A3-16-all-fractions_k255_6260130_28
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35590..36831)
DNA (1242bp) protein (414aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; Phosphoribosylglycinamide synthetase {ECO:0000256|HAMAP-Rule:MF_00138}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
purD; phosphoribosylamine--glycine ligase (EC:6.3.4.13)
phosphoribosylamine--glycine ligase n=1 Tax=Massilia niastensis RepID=UPI00037BB9F1
Displaying 28 items

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