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A3-16-all-fractions_k255_7065725

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_7065725_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

280..1317
-----------------
DNA (1038bp)
protein (346aa)
N-acetyl-gamma-glutamyl-phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393}; Short=AGPR {ECO:0000256|HAMAP-Rule:MF_00150};; EC=1.2.1.38 {ECO:0000256|HAMAP-Rule:MF_00150, ECO:0000256|SAAS:SAAS00137393};; N-acetyl-glutamate semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00150}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
argC; N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
N-acetyl-gamma-glutamyl-phosphate reductase n=1 Tax=Massilia niastensis RepID=UPI0003654D59
A3-16-all-fractions_k255_7065725_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1458..1871
-----------------
DNA (414bp)
protein (138aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036F632A
Cell shape determination protein CcmA {ECO:0000313|EMBL:KGF80720.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_7065725_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1926..2297
-----------------
DNA (372bp)
protein (124aa)
Putative iron-sulfur cluster insertion protein ErpA n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DAM1_9BURK
Putative iron-sulfur cluster insertion protein ErpA {ECO:0000256|HAMAP-Rule:MF_01380}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_7065725_4
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2518..3969
-----------------
DNA (1452bp)
protein (484aa)
xynB1; endo-1,4-beta-glucanase (EC:3.2.1.4)
glycoside hydrolase family protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDD52
Uncharacterized protein {ECO:0000313|EMBL:KGF80722.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_7065725_5
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3993..6236
-----------------
DNA (2244bp)
protein (748aa)
Glycoside hydrolase family 3 domain protein n=1 Tax=Asticcacaulis excentricus (strain ATCC 15261 / DSM 4724 / VKM B-1370 / CB 48) RepID=E8RPE5_ASTEC
Beta-glucosidase {ECO:0000313|EMBL:KGF80723.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
glycoside hydrolase family 3 domain-containing protein
A3-16-all-fractions_k255_7065725_6
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6325..6636)
-----------------
DNA (312bp)
protein (104aa)
Stress responsive alpha-beta barrel domain protein n=2 Tax=Rhodopirellula baltica RepID=F2B1L2_RHOBT
Stress responsive protein {ECO:0000313|EMBL:KGF80724.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_7065725_7
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6686..7588)
-----------------
DNA (903bp)
protein (301aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00038142F0
Signal peptide protein {ECO:0000313|EMBL:KGF80725.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
signal peptide protein
A3-16-all-fractions_k255_7065725_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7588..8052)
-----------------
DNA (465bp)
protein (155aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036793ED
Uncharacterized protein {ECO:0000313|EMBL:KGF80726.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
signal peptide protein
A3-16-all-fractions_k255_7065725_9
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8144..9247)
-----------------
DNA (1104bp)
protein (368aa)
Anhydro-N-acetylmuramic acid kinase {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085893}; EC=2.7.1.170 {ECO:0000256|HAMAP-Rule:MF_01270, ECO:0000256|SAAS:SAAS00085888};; AnhMurNAc kinase {ECO:0000256|HAMAP-Rule:MF_01270}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003670DE4
anmK; anhydro-N-acetylmuramic acid kinase
A3-16-all-fractions_k255_7065725_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9325..10683)
-----------------
DNA (1359bp)
protein (453aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000361EDE6
Peptidase M23 {ECO:0000313|EMBL:KGF80730.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
peptidase M23 family protein
A3-16-all-fractions_k255_7065725_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10854..12131
-----------------
DNA (1278bp)
protein (426aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02007}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
tyrS; tyrosyl-tRNA synthetase (EC:6.1.1.1)
tyrosyl-tRNA synthetase n=1 Tax=Janthinobacterium sp. CG3 RepID=UPI00034B04D7
A3-16-all-fractions_k255_7065725_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12128..12586
-----------------
DNA (459bp)
protein (153aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
D-tyrosyl-tRNA(Tyr) deacylase (EC:3.6.1.n1)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D978_9BURK
A3-16-all-fractions_k255_7065725_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12648..13322
-----------------
DNA (675bp)
protein (225aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036D34B0
Phospholipid-binding protein {ECO:0000313|EMBL:KGF80733.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ybhB; UPF0098 protein ybhB
A3-16-all-fractions_k255_7065725_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13392..14066
-----------------
DNA (675bp)
protein (225aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DDF0_9BURK
Phosphoglycerate mutase {ECO:0000313|EMBL:KGF80734.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
phosphoglycerate mutase family protein
A3-16-all-fractions_k255_7065725_15
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14375..15352
-----------------
DNA (978bp)
protein (326aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
tRNA-dihydrouridine synthase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DRA0_9BURK
TIM-barrel , nifR3 family protein
A3-16-all-fractions_k255_7065725_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15430..15663
-----------------
DNA (234bp)
protein (78aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DAN6_9BURK
Fis family transcriptional regulator {ECO:0000313|EMBL:KGF80736.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
bacterial regulatory , Fis family protein
A3-16-all-fractions_k255_7065725_17
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15758..17344
-----------------
DNA (1587bp)
protein (529aa)
purH; bifunctional purine biosynthesis protein PurH (EC:2.1.2.3)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D986_9BURK
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_7065725_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17511..18056
-----------------
DNA (546bp)
protein (182aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ruvC; crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Holliday junction resolvase n=1 Tax=Massilia niastensis RepID=UPI00036DDB78
A3-16-all-fractions_k255_7065725_19
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18073..18651
-----------------
DNA (579bp)
protein (193aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ruvA; holliday junction DNA helicase RuvA (EC:3.6.1.-)
Holliday junction DNA helicase RuvA n=1 Tax=Oxalobacteraceae bacterium JGI 0001004-K23 RepID=UPI0003729AC7
A3-16-all-fractions_k255_7065725_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18667..19734
-----------------
DNA (1068bp)
protein (356aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ruvB; holliday junction DNA helicase RuvB (EC:3.6.1.-)
Holliday junction DNA helicase RuvB n=1 Tax=Massilia niastensis RepID=UPI000369179E
A3-16-all-fractions_k255_7065725_21
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19735..20142)
-----------------
DNA (408bp)
protein (136aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000379C126
Uncharacterized protein {ECO:0000313|EMBL:KGF80741.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_7065725_22
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(20669..21061)
-----------------
DNA (393bp)
protein (131aa)
cytoplasmic protein id=14627352 bin=bin7_NC10_sister species=Dyella japonica genus=Dyella taxon_order=Xanthomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
cytoplasmic protein
Tax=RBG_13_Acidobacteria_68_16_curated
A3-16-all-fractions_k255_7065725_23
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21606..21956
-----------------
DNA (351bp)
protein (117aa)
Phasin family protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DVC1_9BURK
Phasin family protein {ECO:0000313|EMBL:EKU82637.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
A3-16-all-fractions_k255_7065725_24
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22407..22859)
-----------------
DNA (453bp)
protein (151aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036C8531
Signal peptide protein {ECO:0000313|EMBL:KGF80742.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
signal peptide protein
A3-16-all-fractions_k255_7065725_25
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23013..24479)
-----------------
DNA (1467bp)
protein (489aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
valS; valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DVE2_9BURK
Displaying 25 items

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