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A3-16-all-fractions_k255_7358156

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_7358156_1

Not on your lists

comp(1..213)
DNA (213bp) protein (71aa)
Sodium:solute symporter family n=1 Tax=uncultured organism RepID=T1WCG4_9ZZZZ
Sodium:solute symporter family {ECO:0000313|EMBL:AGU11835.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
sodium transporter
A3-16-all-fractions_k255_7358156_2
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(668..2275)
DNA (1608bp) protein (536aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000366C39A
methyl-accepting chemotaxis sensory transducer
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:AEK60756.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
A3-16-all-fractions_k255_7358156_3
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2519..3169
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F6C7B3
Cytochrome C {ECO:0000313|EMBL:KIF79933.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
chaperone protein HtpG
A3-16-all-fractions_k255_7358156_4
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3166..5970
DNA (2805bp) protein (935aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D95B24
4Fe-4S ferredoxin
Quinol:cytochrome c oxidoreductase iron-sulfur protein {ECO:0000313|EMBL:AAZ63779.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
A3-16-all-fractions_k255_7358156_5
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5967..7364
DNA (1398bp) protein (466aa)
Fe-S-cluster-containing hydrogenase n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F11751
Hydrogenase {ECO:0000313|EMBL:KIF79934.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
polysulfide reductase NrfD
A3-16-all-fractions_k255_7358156_6
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7361..7900
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D6801F
Membrane protein {ECO:0000313|EMBL:KIF83436.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
A3-16-all-fractions_k255_7358156_7
Rhodanobacter fulvus, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7897..8505
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000308665A
Uncharacterized protein {ECO:0000313|EMBL:EIL90415.1}; TaxID=1163408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter fulvus Jip2.;"
hypothetical protein
A3-16-all-fractions_k255_7358156_8
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8502..9518
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00031C31FD
signal peptide
Quinol:cytochrome c oxidoreductase quinone-binding subunit 2 {ECO:0000313|EMBL:AAZ63783.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
A3-16-all-fractions_k255_7358156_9
RBG_16_NC10_65_8_curated, NC10, Bacteria

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9511..9942
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002E94F3F
hypothetical protein
Tax=RBG_16_NC10_65_8_curated
A3-16-all-fractions_k255_7358156_10
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9939..10727
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D6772C
SCO1/SenC family protein
SCO1/SenC family protein {ECO:0000313|EMBL:AAZ63785.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
A3-16-all-fractions_k255_7358156_11
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10724..11668
DNA (945bp) protein (315aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003019030
Cytochrome B561 {ECO:0000313|EMBL:KIF79935.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
cytochrome c oxidase subunit II
A3-16-all-fractions_k255_7358156_12
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11649..13295
DNA (1647bp) protein (549aa)
cytochrome C oxidase subunit I (EC:1.9.3.1)
cytochrome C oxidase subunit I n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000301F116
Cytochrome c oxidase subunit I {ECO:0000313|EMBL:KIF79936.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
A3-16-all-fractions_k255_7358156_13
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13292..13948
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0003142E7D
Uncharacterized protein {ECO:0000313|EMBL:KIF79937.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
cytochrome c oxidase subunit III
A3-16-all-fractions_k255_7358156_14
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13950..14276
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002F67DBA
Caa(3)-type oxidase subunit IV {ECO:0000313|EMBL:KIF79938.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
Caa(3)-type oxidase subunit IV
A3-16-all-fractions_k255_7358156_15
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15018..17204
DNA (2187bp) protein (729aa)
cellulose 1,4-beta-cellobiosidase (EC:3.2.1.91)
UPI0003D6047C related cluster n=1 Tax=unknown RepID=UPI0003D6047C
LacI family transcriptional regulator {ECO:0000313|EMBL:ETI60138.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
A3-16-all-fractions_k255_7358156_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17439..18611
DNA (1173bp) protein (391aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Burkholderia sp. BT03 RepID=J3BKE4_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF79347.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
signaling protein (GGDEF domain)
A3-16-all-fractions_k255_7358156_17
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18617..19411)
DNA (795bp) protein (265aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037EAA5D
Uncharacterized protein {ECO:0000313|EMBL:KGF79348.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_7358156_18
Deinococcus maricopensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(19465..20658)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035DB392
glycoside hydrolase family 1
Glycoside hydrolase family 1 {ECO:0000313|EMBL:ADV66571.1}; TaxID=709986 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946; / LB-34).;"
A3-16-all-fractions_k255_7358156_19
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20658..21815)
DNA (1158bp) protein (386aa)
Lactate dehydrogenase {ECO:0000313|EMBL:KIF80075.1}; EC=1.1.2.3 {ECO:0000313|EMBL:KIF80075.1};; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
Dehydrogenase, FMN-dependent n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RNJ1_9PROT
L-lactate dehydrogenase
A3-16-all-fractions_k255_7358156_20
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21826..23463)
DNA (1638bp) protein (546aa)
Glucose-methanol-choline oxidoreductase n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7QJA8_METSZ
Choline dehydrogenase {ECO:0000313|EMBL:KIF80074.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
glucose-methanol-choline oxidoreductase
A3-16-all-fractions_k255_7358156_21
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23460..24071)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A630_DEIPD
Uncharacterized protein {ECO:0000313|EMBL:KIF80073.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
A3-16-all-fractions_k255_7358156_22
Methylocystis sp. SC2, Methylocystis, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24068..25024)
DNA (957bp) protein (319aa)
Putative membrane protein n=1 Tax=Methylocystis sp. (strain SC2) RepID=J7Q5D7_METSZ
membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCJ08924.1}; TaxID=187303 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylocystaceae; Methylocystis.;" source="Methylocystis sp. (strain SC2).;"
A3-16-all-fractions_k255_7358156_23
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25021..26808)
DNA (1788bp) protein (596aa)
Thiamine pyrophosphate enzyme, N-terminal TPP binding domain n=1 Tax=uncultured organism RepID=T1WA29_9ZZZZ
Thiamine pyrophosphate-binding protein {ECO:0000313|EMBL:KGF79349.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
thiamine pyrophosphate enzyme TPP binding domain-containing protein
A3-16-all-fractions_k255_7358156_24
Burkholderia terrae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26837..27850)
DNA (1014bp) protein (338aa)
short-chain dehydrogenase/reductase SDR (EC:1.1.1.100)
Short chain dehydrogenase n=1 Tax=Burkholderia terrae BS001 RepID=I5CVW5_9BURK
Short chain dehydrogenase {ECO:0000313|EMBL:EIN00034.1}; TaxID=1171375 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia terrae BS001.;"
A3-16-all-fractions_k255_7358156_25

Not on your lists

comp(28014..28898)
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium CSL132 RepID=G4WVJ5_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AEQ20447.1}; TaxID=1091568 species="Bacteria; environmental samples.;" source="uncultured bacterium CSL132.;"
A3-16-all-fractions_k255_7358156_26
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29119..31911)
DNA (2793bp) protein (931aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D5Z5_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU79703.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
glycoside hydrolase family 2 TIM barrel
A3-16-all-fractions_k255_7358156_27
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32151..33020
DNA (870bp) protein (290aa)
Short-chain dehydrogenase protein n=1 Tax=Rhizobium etli bv. mimosae str. Mim1 RepID=S5RYJ8_RHIET
short-chain dehydrogenase protein
Short-chain dehydrogenase protein {ECO:0000313|EMBL:AGS20161.1}; TaxID=1328306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli bv. mimosae str. Mim1.;"
A3-16-all-fractions_k255_7358156_28
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33031..34527)
DNA (1497bp) protein (499aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002F19D92
histidine kinase
A3-16-all-fractions_k255_7358156_29
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34511..35206)
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim47 RepID=UPI0002F87E98
Transcriptional regulator {ECO:0000313|EMBL:KGF79351.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
two component transcriptional regulator
A3-16-all-fractions_k255_7358156_30
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35350..36633
DNA (1284bp) protein (428aa)
Putative ABC transporter substrate binding protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPJ6_RUBGI
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGF79352.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative ABC transporter substrate binding protein
Displaying items 1-30 of 34 in total

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