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A3-16-all-fractions_k255_3674164_1

Organism: A3-16-all-fractions_metab_conc_15

partial RP 23 / 55 BSCG 22 / 51 MC: 2 ASCG 8 / 38 MC: 3
Location: 1..525

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 174.0
  • Bit_score: 335
  • Evalue 4.10e-89
mfd; transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 174.0
  • Bit_score: 289
  • Evalue 3.90e-76
Transcription-repair-coupling factor n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D7C8_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 89.1
  • Coverage: 174.0
  • Bit_score: 313
  • Evalue 1.20e-82

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Taxonomy

Massilia sp. JS1662 → Massilia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATCGGCTTCCAGCTGTACTCCGACATGCTGAACGAAGCCGTGAAGGCGCTGAAGGCCGGCCGCGAACCCGACATGAGCGCGCCGCTGTCGTCGACCACGGAGATCAACCTGCACGTGCCCGCGCTGCTGCCGTCCGATTTCTGCGGCGACGTGCACGAGCGCCTGTCGATCTACAAGCGCCTCGCCAACTGCGAGGAGCAGGGCCGCATCGACGACATGCAGGAAGAACTCATCGACCGTTTCGGCAAGCTGCCGGATGCCGTGAAGGCGCTGATCGAGACGCACCGCCTGCGCATCGCGGCGAAGTCAGTCGGCATCGTGAAGATCGACGCCCATGCGGATGCAGCCAGCCTGCAGTTCATGGAAAAGCCGCCGATCGATCCGATCAAGATCATCACCCTGATCCAGAAGAACCGCCACGTCAAGCTGGCCGGGCAGGACAAGCTGCGCATCACGGCCAACATGCCGGACCTGCCCGCGCGCGTGAACCAGGTCAAGCAGACCATCAAACAACTCCTCGCCTAA
PROTEIN sequence
Length: 175
IGFQLYSDMLNEAVKALKAGREPDMSAPLSSTTEINLHVPALLPSDFCGDVHERLSIYKRLANCEEQGRIDDMQEELIDRFGKLPDAVKALIETHRLRIAAKSVGIVKIDAHADAASLQFMEKPPIDPIKIITLIQKNRHVKLAGQDKLRITANMPDLPARVNQVKQTIKQLLA*