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A3-16-all-fractions_k255_3674164

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_3674164_1
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..525
DNA (525bp) protein (175aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
mfd; transcription-repair coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D7C8_9BURK
A3-16-all-fractions_k255_3674164_2
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

547..1395
DNA (849bp) protein (283aa)
serB; phosphoserine phosphatase SerB (EC:3.1.3.3)
Phosphoserine phosphatase SerB n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DN17_9BURK
Phosphoserine phosphatase {ECO:0000313|EMBL:KGF82043.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_3674164_3
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1565..2086
DNA (522bp) protein (174aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF82041.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_3674164_4
Burkholderia caribensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2105..3220)
DNA (1116bp) protein (372aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000301AF88
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:ETY78321.1}; TaxID=1323664 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia caribensis MBA4.;"
major facilitator superfamily protein
A3-16-all-fractions_k255_3674164_5
Idiomarina loihiensis, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3311..3541)
DNA (231bp) protein (77aa)
Predicted membrane protein n=2 Tax=Idiomarina loihiensis RepID=Q5R001_IDILO
hypothetical protein
Predicted membrane protein {ECO:0000313|EMBL:AAV80929.1}; TaxID=283942 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR).;"
A3-16-all-fractions_k255_3674164_6
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3928..6450
DNA (2523bp) protein (841aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DJ37_9BURK
TonB-dependent receptor {ECO:0000313|EMBL:KFI08509.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
TonB-dependent receptor
A3-16-all-fractions_k255_3674164_7
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(6457..7431)
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000368DF01
glycosyl hydrolase
Glycosyl hydrolase (Secreted protein) {ECO:0000313|EMBL:ABJ84228.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
A3-16-all-fractions_k255_3674164_8
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7451..8434)
DNA (984bp) protein (328aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Herbaspirillum sp. CF444 RepID=J2M2C5_9BURK
Aldo/keto reductase {ECO:0000313|EMBL:KGF82040.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
aldo/keto reductase
A3-16-all-fractions_k255_3674164_9
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8577..9494)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Sphingopyxis alaskensis (strain DSM 13593 / LMG 18877 / RB2256) RepID=Q1GRZ9_SPHAL
Transporter {ECO:0000313|EMBL:KGF82038.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_3674164_10
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9679..10080
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:KGF82037.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_3674164_11
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10344..11501
DNA (1158bp) protein (386aa)
Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein BraC n=1 Tax=Janthinobacterium sp. HH01 RepID=L9P9I7_9BURK
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGF82036.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
amino acid ABC transporter substrate-binding protein
A3-16-all-fractions_k255_3674164_12
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11604..12494
DNA (891bp) protein (297aa)
inner-membrane translocator (EC:3.6.3.17)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Herbaspirillum sp. CF444 RepID=J2KYW8_9BURK
ABC transporter permease {ECO:0000313|EMBL:KGF82035.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_3674164_13
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12497..14452
DNA (1956bp) protein (652aa)
ABC transporter-like protein n=1 Tax=Janthinobacterium sp. HH01 RepID=L9P9U5_9BURK
ABC transporter {ECO:0000313|EMBL:KGF82034.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
putative ABC transporter
A3-16-all-fractions_k255_3674164_14
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14470..15192
DNA (723bp) protein (241aa)
amino acid ABC transporter ATPase n=1 Tax=Janthinobacterium lividum RepID=UPI000288FFD8
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGF82033.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
livF; branched-chain amino acid ABC transporter ATPase
A3-16-all-fractions_k255_3674164_15
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(15171..16337)
DNA (1167bp) protein (389aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI0003673430
penicillin epimerase
Penicillin epimerase {ECO:0000313|EMBL:AKD53732.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
A3-16-all-fractions_k255_3674164_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16384..17523)
DNA (1140bp) protein (380aa)
glycerate kinase (EC:2.7.1.31)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000368A2B4
Glycerate kinase {ECO:0000313|EMBL:KGF82032.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
A3-16-all-fractions_k255_3674164_17
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17533..18894)
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI0003790609
MFS transporter permease {ECO:0000313|EMBL:KGF82031.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
major facilitator transporter
A3-16-all-fractions_k255_3674164_18
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19081..20229
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036CC66D
Transcriptional regulator {ECO:0000313|EMBL:KGF82030.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_3674164_19
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20420..21223
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000365E367
Membrane protein {ECO:0000313|EMBL:KGF82027.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_3674164_20
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21280..21627
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00035E53B8
Uncharacterized protein {ECO:0000313|EMBL:KGF82025.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_3674164_21
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21921..22334)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DA82_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KGF82023.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_3674164_22
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22381..23151)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YCR6_NITMU
Uncharacterized protein {ECO:0000313|EMBL:KGF82022.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
hypothetical protein
A3-16-all-fractions_k255_3674164_23
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23148..23996)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000379DCA3
Uncharacterized protein {ECO:0000313|EMBL:KFI07810.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
hypothetical protein
A3-16-all-fractions_k255_3674164_24
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24084..24527)
DNA (444bp) protein (148aa)
Thioredoxin n=1 Tax=Acinetobacter baumannii NIPH 60 RepID=N8XVF2_ACIBA
Thioredoxin {ECO:0000313|EMBL:KIF82085.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
thioredoxin
A3-16-all-fractions_k255_3674164_25
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24701..25654
DNA (954bp) protein (318aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00036DC5E3
Membrane protein {ECO:0000313|EMBL:KGF82019.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
ABC transporter-like protein
A3-16-all-fractions_k255_3674164_26
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25655..26818)
DNA (1164bp) protein (388aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:KGF82018.1}; EC=4.4.1.8 {ECO:0000313|EMBL:KGF82018.1};; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
metC; cystathionine beta-lyase (EC:4.4.1.8)
cystathionine beta-lyase n=1 Tax=Massilia niastensis RepID=UPI000377677B
A3-16-all-fractions_k255_3674164_27
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26847..28250)
DNA (1404bp) protein (468aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DRZ7_9BURK
RNA modification enzyme, MiaB family protein
A3-16-all-fractions_k255_3674164_28
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28386..28943)
DNA (558bp) protein (186aa)
Polyhydroxyalkanoate synthesis repressor PhaR n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D6B8_9BURK
Polyhydroxyalkanoate synthesis repressor PhaR {ECO:0000313|EMBL:KGF82016.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
phaR; polyhydroxyalkanoate synthesis repressor PhaR
A3-16-all-fractions_k255_3674164_29
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29121..30890)
DNA (1770bp) protein (590aa)
phbC; poly-beta-hydroxybutyrate polymerase (EC:2.3.1.-)
Poly(R)-hydroxyalkanoic acid synthase, class I n=1 Tax=Massilia timonae CCUG 45783 RepID=K9D7B4_9BURK
Poly(R)-hydroxyalkanoic acid synthase {ECO:0000313|EMBL:KGF82015.1}; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia sp. JS1662.;"
Displaying 29 items

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