ggKbase home page

A3-16-all-fractions_k255_2163477

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_2163477_1
unknown

Not on your lists

comp(2..79)
DNA (78bp) protein (26aa)

This feature has no annotations

A3-16-all-fractions_k255_2163477_2
unknown

Not on your lists

156..947
DNA (792bp) protein (264aa)

This feature has no annotations

A3-16-all-fractions_k255_2163477_3
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1281..1706
DNA (426bp) protein (142aa)
oxidoreductase n=1 Tax=Frankia sp. BCU110501 RepID=UPI00035F8A32
pyridoxamine 5'-phosphate oxidase-like protein
Pyridoxamine 5'-phosphate oxidase-related FMN-binding {ECO:0000313|EMBL:ABW15979.1}; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EAN1pec).;"
A3-16-all-fractions_k255_2163477_4
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1652..2827)
DNA (1176bp) protein (392aa)
Major facilitator superfamily MFS_1 n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SPT4_NOCSJ
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABL83819.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
A3-16-all-fractions_k255_2163477_5
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2902..4194)
DNA (1293bp) protein (431aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000256|RuleBase:RU003370}; EC=2.3.3.16 {ECO:0000256|RuleBase:RU003370};; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
type II citrate synthase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3D7D9
citrate synthase i
A3-16-all-fractions_k255_2163477_6
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4227..4622)
DNA (396bp) protein (132aa)
Thioesterase superfamily protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4F4N6_VERMA
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:AEB44178.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-18-032).;"
A3-16-all-fractions_k255_2163477_7
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4676..5314)
DNA (639bp) protein (213aa)
histidine kinase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B64F5B
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ADB34013.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
A3-16-all-fractions_k255_2163477_8
Nocardia cyriacigeorgica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5361..6863)
DNA (1503bp) protein (501aa)
Putative monooxygenase n=1 Tax=Nocardia cyriacigeorgica (strain GUH-2) RepID=H6RDB4_NOCCG
putative monooxygenase
Putative monooxygenase {ECO:0000313|EMBL:CCF63962.1}; TaxID=1127134 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia cyriacigeorgica (strain GUH-2).;"
A3-16-all-fractions_k255_2163477_9
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7014..8159
DNA (1146bp) protein (382aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
Cytosine-specific methyltransferase n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7PYN9_CATAD
DNA-cytosine methyltransferase
A3-16-all-fractions_k255_2163477_10
Rhodococcus triatomae, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8151..8531)
DNA (381bp) protein (127aa)
DNA mismatch endonuclease n=1 Tax=Gordonia neofelifaecis NRRL B-59395 RepID=F1YPS1_9ACTO
Very short patch repair protein {ECO:0000313|EMBL:EME14427.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus triatomae BKS 15-14.;"
DNA mismatch endonuclease Vsr
A3-16-all-fractions_k255_2163477_11
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8818..9072
DNA (255bp) protein (85aa)
PspC domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SFA5_NOCSJ
PspC domain-containing protein
PspC domain protein {ECO:0000313|EMBL:ABL80490.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
A3-16-all-fractions_k255_2163477_12
unknown

Not on your lists

9211..9456
DNA (246bp) protein (82aa)

This feature has no annotations

A3-16-all-fractions_k255_2163477_13
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9535..10170
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JLK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS32037.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
Zn-dependent hydrolase
A3-16-all-fractions_k255_2163477_14
Leifsonia rubra, Leifsonia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10121..10672)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Leifsonia rubra CMS 76R RepID=S7XB07_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPR76209.1}; TaxID=1348338 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia.;" source="Leifsonia rubra CMS 76R.;"
hypothetical protein
A3-16-all-fractions_k255_2163477_15
Cryobacterium roopkundense, Cryobacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10669..11286)
DNA (618bp) protein (206aa)
DNA-binding protein n=1 Tax=Humibacter albus RepID=UPI0003B75F7A
Uncharacterized protein {ECO:0000313|EMBL:KGJ78993.1}; TaxID=1001240 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Cryobacterium.;" source="Cryobacterium roopkundense.;"
DNA-binding protein
A3-16-all-fractions_k255_2163477_16
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11486..12214)
DNA (729bp) protein (243aa)
Putative Delta-1-pyrroline-5-carboxylate dehydrogenase (RocA) {ECO:0000313|EMBL:CCH76068.1}; EC=1.5.1.12 {ECO:0000313|EMBL:CCH76068.1};; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
1-pyrroline-5-carboxylate dehydrogenase n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XTE6_MICPN
Displaying 16 items

View Taxonomy