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A3-16-all-fractions_k255_3009890

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_3009890_1
unknown

Not on your lists

3..74
DNA (72bp) protein (24aa)

This feature has no annotations

A3-16-all-fractions_k255_3009890_2
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

71..1360
DNA (1290bp) protein (430aa)
MFS transporter n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B377C0
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACY96413.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
A3-16-all-fractions_k255_3009890_3
Amycolatopsis sp. MJM2582, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1411..1761
DNA (351bp) protein (117aa)
membrane protein n=1 Tax=Amycolatopsis alba RepID=UPI00037B72B3
Membrane protein {ECO:0000313|EMBL:KFZ77833.1}; TaxID=1427749 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis sp. MJM2582.;"
Conserved putative membrane protein
A3-16-all-fractions_k255_3009890_4
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1768..2535
DNA (768bp) protein (256aa)
tRNA/rRNA methyltransferase (EC:2.1.1.-)
rRNA methyltransferase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3D237
rRNA methyltransferase {ECO:0000313|EMBL:KEI45475.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
A3-16-all-fractions_k255_3009890_5
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2569..2895)
DNA (327bp) protein (109aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI0003632868
Uncharacterized protein {ECO:0000313|EMBL:EJJ02578.1}; TaxID=1160718 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
hypothetical protein
A3-16-all-fractions_k255_3009890_6
Segniliparus rotundus, Segniliparus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2871..4289)
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI0003790F19
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG99236.1}; TaxID=640132 species="Bacteria; Actinobacteria; Corynebacteriales; Segniliparaceae; Segniliparus.;" source="Segniliparus rotundus (strain ATCC BAA-972 / CDC 1076 / CIP 108378 /; DSM 44985 / JCM 13578).;"
A3-16-all-fractions_k255_3009890_7
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4507..6336)
DNA (1830bp) protein (610aa)
ABC transporter related n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q2C3_CATAD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU69765.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
A3-16-all-fractions_k255_3009890_8
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6333..8111)
DNA (1779bp) protein (593aa)
ABC transporter n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ESF1_MODMB
ABC transporter
ABC transporter {ECO:0000313|EMBL:CCH86314.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
A3-16-all-fractions_k255_3009890_9
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8198..9256)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4ESF2_MODMB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH86315.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
A3-16-all-fractions_k255_3009890_10
Mycobacterium sinense, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9341..10462)
DNA (1122bp) protein (374aa)
Phosphoserine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; EC=2.6.1.52 {ECO:0000256|HAMAP-Rule:MF_00160};; Phosphohydroxythreonine aminotransferase {ECO:0000256|HAMAP-Rule:MF_00160}; TaxID=875328 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium sp. (strain JDM601).;"
Phosphoserine aminotransferase n=1 Tax=Mycobacterium sp. (strain JDM601) RepID=F5YSH4_MYCSD
serC; phosphoserine aminotransferase SerC
A3-16-all-fractions_k255_3009890_11
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10500..10847)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2PX86_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EMD24245.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
hypothetical protein
A3-16-all-fractions_k255_3009890_12
Rhodococcus rhodnii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10840..12138)
DNA (1299bp) protein (433aa)
L-gulonolactone oxidase (EC:1.1.3.-)
L-gulonolactone oxidase n=1 Tax=Rhodococcus rhodnii LMG 5362 RepID=R7WPW3_9NOCA
L-gulonolactone oxidase {ECO:0000313|EMBL:EOM77357.1}; TaxID=1273125 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus rhodnii LMG 5362.;"
A3-16-all-fractions_k255_3009890_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12214..12843
DNA (630bp) protein (210aa)
Regulatory protein TetR n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CYK5_PSEUX
TetR family transcriptional regulator
Regulatory protein TetR {ECO:0000313|EMBL:AEA26575.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
A3-16-all-fractions_k255_3009890_14
Rhodococcus qingshengii, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12840..13976
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Rhodococcus erythropolis SK121 RepID=C3JTL8_RHOER
Alanine racemase {ECO:0000313|EMBL:KDQ02447.1}; TaxID=334542 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus qingshengii.;"
alanine racemase
A3-16-all-fractions_k255_3009890_15
unknown

Not on your lists

comp(14089..14883)
DNA (795bp) protein (265aa)

This feature has no annotations

A3-16-all-fractions_k255_3009890_16
Prauserella sp. Am3, Prauserella, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14956..15255
DNA (300bp) protein (100aa)
Transcriptional regulator, ArsR family n=1 Tax=Mycobacterium sp. (strain JLS) RepID=A3Q8C9_MYCSJ
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:KID32203.1}; TaxID=1515610 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Prauserella.;" source="Prauserella sp. Am3.;"
A3-16-all-fractions_k255_3009890_17
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15252..15638
DNA (387bp) protein (129aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI0003775455
Uncharacterized protein {ECO:0000313|EMBL:KEI43558.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula.;"
glyoxalase/bleomycin resistance protein/dioxygenase
A3-16-all-fractions_k255_3009890_18
Kutzneria albida, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15653..16759)
DNA (1107bp) protein (369aa)
Putative citrate synthase 2 (EC:2.3.3.1)
Putative citrate synthase 2 {ECO:0000313|EMBL:AHH93979.1}; EC=2.3.3.1 {ECO:0000313|EMBL:AHH93979.1};; TaxID=1449976 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria albida DSM 43870.;"
citrate synthase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B732F4
A3-16-all-fractions_k255_3009890_19
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16876..17520
DNA (645bp) protein (215aa)
Pyridoxine/pyridoxamine 5'-phosphate oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; EC=1.4.3.5 {ECO:0000256|HAMAP-Rule:MF_01629};; PNP/PMP oxidase {ECO:0000256|HAMAP-Rule:MF_01629}; Pyridoxal 5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_01629}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
pdxH; pyridoxamine 5'-phosphate oxidase (EC:1.4.3.5)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI0003725A7E
A3-16-all-fractions_k255_3009890_20
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17664..18911
DNA (1248bp) protein (416aa)
MFS transporter permease n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B57993
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP81695.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
A3-16-all-fractions_k255_3009890_21
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18908..19804
DNA (897bp) protein (299aa)
aldose-1-epimerase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B44A8F
Galactose mutarotase {ECO:0000313|EMBL:EWT00700.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
aldose 1-epimerase
A3-16-all-fractions_k255_3009890_22
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19813..21150)
DNA (1338bp) protein (446aa)
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:AIY16975.1}; EC=4.1.99.3 {ECO:0000313|EMBL:AIY16975.1};; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
hypothetical protein n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00035D4C66
deoxyribodipyrimidine photolyase
A3-16-all-fractions_k255_3009890_23
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21167..21619
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3F1EF
Putative uncharacterized protein {ECO:0000313|EMBL:GAB08009.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
Hypothetical protein
A3-16-all-fractions_k255_3009890_24
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21623..23098)
DNA (1476bp) protein (492aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000368789D
Major facilitator superfamily protein {ECO:0000313|EMBL:EHH09664.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
transporter
A3-16-all-fractions_k255_3009890_25
Streptomyces sp. AcH 505, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23201..24082
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000376D67E
XRE family transcriptional regulator {ECO:0000313|EMBL:KIF69994.1}; TaxID=352211 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. AcH 505.;"
XRE family transcriptional regulator
A3-16-all-fractions_k255_3009890_26
Arthrobacter sp. MWB30, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24073..24708
DNA (636bp) protein (212aa)
beta-lactamase n=1 Tax=Arthrobacter sp. 131MFCol6.1 RepID=UPI0003675E47
Uncharacterized protein {ECO:0000313|EMBL:KIA72465.1}; TaxID=1534409 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. MWB30.;"
hypothetical protein
A3-16-all-fractions_k255_3009890_27
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24719..25840
DNA (1122bp) protein (374aa)
membrane dipeptidase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B57935
Membrane dipeptidase {ECO:0000313|EMBL:KJY39345.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
putative dipeptidase
A3-16-all-fractions_k255_3009890_28
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25891..26448
DNA (558bp) protein (186aa)
Putative PadR family transcriptional regulator n=1 Tax=Nocardia asteroides NBRC 15531 RepID=U5EPI6_NOCAS
Transcriptional regulator, PadR family {ECO:0000313|EMBL:CEL12945.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
transcriptional regulator
A3-16-all-fractions_k255_3009890_29
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26445..27512
DNA (1068bp) protein (356aa)
NADPH-dependent 2,4-dienoyl-CoA reductase n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HRJ2_9PSEU
fadH; NADPH-dependent 2,4-dienoyl-CoA reductase
NADPH-dependent 2,4-dienoyl-CoA reductase {ECO:0000313|EMBL:AEK38810.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
Displaying 29 items

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