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A3-16-all-fractions_k255_5262890

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_5262890_1
Streptomyces griseoaurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..412)
DNA (411bp) protein (137aa)
Short chain dehydrogenase n=1 Tax=Streptomyces griseoaurantiacus M045 RepID=F3NH17_9ACTO
Short chain dehydrogenase {ECO:0000313|EMBL:EGG47144.1}; TaxID=996637 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces griseoaurantiacus M045.;"
short-chain dehydrogenase/reductase SDR
A3-16-all-fractions_k255_5262890_2
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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1256..2932
DNA (1677bp) protein (559aa)
qcrB; menaquinol-cytochrome c reductase cytochrome b subunit (EC:1.10.2.-)
Menaquinol-cytochrome c reductase cytochrome b subunit {ECO:0000313|EMBL:CCG03018.1}; EC=1.10.2.- {ECO:0000313|EMBL:CCG03018.1};; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
menaquinol-cytochrome C reductase cytochrome b subunit n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B637F8
A3-16-all-fractions_k255_5262890_3
Actinomyces naeslundii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3060..4238)
DNA (1179bp) protein (393aa)
NlpC/P60 family protein n=1 Tax=Actinomyces naeslundii str. Howell 279 RepID=J3A7Q4_ACTNA
NlpC/P60 family protein {ECO:0000313|EMBL:EJN83383.1}; TaxID=1115803 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces naeslundii (strain ATCC 12104 / DSM 43013 / JCM 8349 /; NCTC 10301 / Howell 279).;"
hypothetical protein
A3-16-all-fractions_k255_5262890_4
Blastococcus saxobsidens, Blastococcus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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comp(4419..4841)
DNA (423bp) protein (141aa)
ctaF; cytochrome c oxidase polypeptide 4 (EC:1.9.3.1)
Cytochrome c oxidase polypeptide 4 {ECO:0000256|PIRNR:PIRNR017385, ECO:0000313|EMBL:CCG03017.1}; EC=1.9.3.1 {ECO:0000256|PIRNR:PIRNR017385, ECO:0000313|EMBL:CCG03017.1};; Cytochrome aa3 subunit 4 {ECO:0000256|PIRNR:PIRNR017385}; Cytochrome c oxidase polypeptide IV {ECO:0000256|PIRNR:PIRNR017385}; TaxID=1146883 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Blastococcus.;" source="Blastococcus saxobsidens (strain DD2).;"
cytochrome oxidase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B67AE5
A3-16-all-fractions_k255_5262890_5
Nocardia nova, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(4843..5790)
DNA (948bp) protein (316aa)
ctaC; putative cytochrome c oxidase subunit 2 (EC:1.9.3.1)
Putative cytochrome c oxidase subunit 2 {ECO:0000313|EMBL:AHH17096.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AHH17096.1};; TaxID=1415166 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia nova SH22a.;"
Cytochrome c oxidase subunit II n=1 Tax=Rhodococcus sp. AW25M09 RepID=L8DH92_9NOCA
A3-16-all-fractions_k255_5262890_6
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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6049..7194
DNA (1146bp) protein (382aa)
cysteine desulfurase (EC:2.8.1.7)
Class V aminotransferase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RLQ7_9ACTO
Class V aminotransferase {ECO:0000313|EMBL:EEP70966.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
A3-16-all-fractions_k255_5262890_7
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7191..7412
DNA (222bp) protein (74aa)
preprotein translocase subunit TatB n=1 Tax=Salinispora arenicola RepID=UPI00037358B0
SirA family protein
SirA family protein {ECO:0000313|EMBL:ABL82645.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
A3-16-all-fractions_k255_5262890_8
Streptomyces collinus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7423..8796
DNA (1374bp) protein (458aa)
Aminotransferase n=1 Tax=Streptomyces collinus Tu 365 RepID=S5UP93_STRCU
aminotransferase
Aminotransferase {ECO:0000313|EMBL:AGS67616.1}; TaxID=1214242 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces collinus Tu 365.;"
A3-16-all-fractions_k255_5262890_9
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8793..9557
DNA (765bp) protein (255aa)
short-chain dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003487E12
Short-chain dehydrogenase {ECO:0000313|EMBL:EWT01492.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
dehydrogenase with different specificities
A3-16-all-fractions_k255_5262890_10
Saccharopolyspora erythraea, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9795..11696
DNA (1902bp) protein (634aa)
asparagine synthase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B33528
Asparagine synthase {ECO:0000313|EMBL:EQD86414.1}; TaxID=1382595 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora erythraea D.;"
asparagine synthase (glutamine-hydrolysing)
A3-16-all-fractions_k255_5262890_11
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11698..12630)
DNA (933bp) protein (311aa)
ribokinase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5DEE1
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR60799.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora carbonacea.;"
ribokinase-like domain-containing protein
A3-16-all-fractions_k255_5262890_12
Knoellia subterranea, Knoellia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12764..13159)
DNA (396bp) protein (132aa)
HesB/YadR/YfhF n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2J8B4_FRASC
Uncharacterized protein {ECO:0000313|EMBL:KGN38455.1}; TaxID=1385521 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Knoellia.;" source="Knoellia subterranea KCTC 19937.;"
HesB/YadR/YfhF
A3-16-all-fractions_k255_5262890_13
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13177..14460
DNA (1284bp) protein (428aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
Quinolinate synthase A n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2MX23_9ACTO
nadA; quinolinate synthetase
A3-16-all-fractions_k255_5262890_14
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14490..15116
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B33354
Uncharacterized protein {ECO:0000313|EMBL:KGH47307.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
hypothetical protein
A3-16-all-fractions_k255_5262890_15
Saccharothrix sp. ST-888, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15113..15568)
DNA (456bp) protein (152aa)
Mini-circle protein n=1 Tax=Streptomyces RepID=UPI000375960E
Mini-circle protein {ECO:0000313|EMBL:KJK58463.1}; TaxID=1427391 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix sp. ST-888.;"
hypothetical protein
A3-16-all-fractions_k255_5262890_16
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15635..16282)
DNA (648bp) protein (216aa)
LuxR family transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5DC6B
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain {ECO:0000313|EMBL:EXG79707.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
LuxR family transcription regulator
A3-16-all-fractions_k255_5262890_17
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16234..17301)
DNA (1068bp) protein (356aa)
Histidine kinase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XAL2_NAKMY
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACV79265.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
Displaying 17 items

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