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A3-16-all-fractions_k255_5611285

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_5611285_1
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(269..736)
DNA (468bp) protein (156aa)
Putative type IV pilin PilA n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VUS3_9ACTO
putative type IV pilin PilA
Putative type IV pilin PilA {ECO:0000313|EMBL:AGZ39485.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
A3-16-all-fractions_k255_5611285_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(864..2099)
DNA (1236bp) protein (412aa)
pilus biosynthesis protein PilC n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B32926
Type II secretory pathway, component PulF {ECO:0000313|EMBL:EXG81058.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
putative type IV pilus biogenesis protein PilC
A3-16-all-fractions_k255_5611285_3
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2096..3172)
DNA (1077bp) protein (359aa)
twitching motility protein pilT n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B51210
Twitching motility protein {ECO:0000313|EMBL:KHD78885.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
pilT; putative type IV pilus retraction protein PilT
A3-16-all-fractions_k255_5611285_4
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3159..4829)
DNA (1671bp) protein (557aa)
General secretion pathway protein E n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8RZ23_ACTS5
pulE; General secretion pathway protein E
General secretion pathway protein E {ECO:0000313|EMBL:AEV82026.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
A3-16-all-fractions_k255_5611285_5
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5071..5313)
DNA (243bp) protein (81aa)
Acyl carrier protein n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FW21_ISOV2
Acyl carrier protein {ECO:0000313|EMBL:KEP24273.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
acyl carrier protein
A3-16-all-fractions_k255_5611285_6
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5462..6334)
DNA (873bp) protein (291aa)
ADP-dependent (S)-NAD(P)H-hydrate dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; EC=4.2.1.136 {ECO:0000256|HAMAP-Rule:MF_01965};; ADP-dependent NAD(P)HX dehydratase {ECO:0000256|HAMAP-Rule:MF_01965}; TaxID=33014 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter michiganensis subsp. insidiosus.;"
ADP-dependent (S)-NAD(P)H-hydrate dehydratase n=1 Tax=Clavibacter michiganensis subsp. sepedonicus (strain ATCC 33113 / DSM 20744 / JCM 9667 / LMG 2889 / C-1) RepID=B0RDJ0_CLAMS
hypothetical protein
A3-16-all-fractions_k255_5611285_7
Arthrobacter sp. FB24, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6321..7052)
DNA (732bp) protein (244aa)
Phosphoglycerate mutase n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JR51_ARTS2
phosphoglycerate mutase
Phosphoglycerate mutase {ECO:0000313|EMBL:ABK01521.1}; TaxID=290399 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. (strain FB24).;"
A3-16-all-fractions_k255_5611285_8
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7221..8009
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Micromonospora RepID=E8RZR5_MICSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL48391.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
A3-16-all-fractions_k255_5611285_9
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8006..8419
DNA (414bp) protein (138aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FLJ3_AMYMS
Uncharacterized protein {ECO:0000313|EMBL:KDN22961.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
A3-16-all-fractions_k255_5611285_10
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8447..9040
DNA (594bp) protein (198aa)
Uncharacterized protein n=3 Tax=Amycolatopsis mediterranei RepID=G0FLJ2_AMYMS
Uncharacterized protein {ECO:0000313|EMBL:KDN22960.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
A3-16-all-fractions_k255_5611285_11
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9050..11323)
DNA (2274bp) protein (758aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6C63B
Sensory box/GGDEF domain/EAL domain protein {ECO:0000313|EMBL:EWM10672.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
A3-16-all-fractions_k255_5611285_12
Tetrasphaera jenkinsii, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11453..12364
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKL2_NAKMY
Uncharacterized protein {ECO:0000313|EMBL:CCI52505.1}; TaxID=1193518 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera jenkinsii Ben 74.;"
hypothetical protein
A3-16-all-fractions_k255_5611285_13
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12307..13287)
DNA (981bp) protein (327aa)
Sulfotransferase n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XKL4_NAKMY
sulfotransferase
Sulfotransferase {ECO:0000313|EMBL:ACV80671.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
A3-16-all-fractions_k255_5611285_14
Catenulispora acidiphila, Catenulispora, Catenulisporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13284..13709)
DNA (426bp) protein (142aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7QD77_CATAD
BadM/Rrf2 family transcriptional regulator family
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:ACU72670.1}; TaxID=479433 species="Bacteria; Actinobacteria; Catenulisporales; Catenulisporaceae; Catenulispora.;" source="Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC; 102108 / JCM 14897).;"
A3-16-all-fractions_k255_5611285_15
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13816..15309
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus M213 RepID=K8X8R8_RHOOP
Uncharacterized protein {ECO:0000313|EMBL:EKT77211.1}; TaxID=1129896 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus M213.;"
hypothetical protein
A3-16-all-fractions_k255_5611285_16
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15376..15522
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Frankia sp. CN3 RepID=G6HQ68_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP84470.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
A3-16-all-fractions_k255_5611285_17
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15577..17553
DNA (1977bp) protein (659aa)
PAS/PAC sensor hybrid histidine kinase (EC:2.7.3.-)
PAS/PAC sensor hybrid histidine kinase {ECO:0000313|EMBL:ABL80776.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABL80776.1};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
PAS/PAC sensor hybrid histidine kinase n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SG41_NOCSJ
A3-16-all-fractions_k255_5611285_18
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17564..18304
DNA (741bp) protein (247aa)
Response regulator receiver n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SG42_NOCSJ
response regulator receiver
Response regulator receiver {ECO:0000313|EMBL:ABL80777.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
A3-16-all-fractions_k255_5611285_19
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18415..19320
DNA (906bp) protein (302aa)
ABC transporter solute binding protein n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3P9Y4_LEIXC
ChaT2 protein {ECO:0000313|EMBL:CCH80318.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
ABC transporter solute binding protein
A3-16-all-fractions_k255_5611285_20
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19317..20126
DNA (810bp) protein (270aa)
hypothetical protein n=1 Tax=Actinoplanes globisporus RepID=UPI00036CAD2F
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ABS01728.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
A3-16-all-fractions_k255_5611285_21
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20123..21034
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Streptomyces afghaniensis 772 RepID=S4MUP4_9ACTO
ABC-3 protein
ABC-3 protein {ECO:0000313|EMBL:AEI11509.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
A3-16-all-fractions_k255_5611285_22
Amycolatopsis lurida, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21063..21458
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Amycolatopsis alba RepID=UPI00036DE880
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJK56459.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL 2430.;"
A3-16-all-fractions_k255_5611285_23
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21721..23130
DNA (1410bp) protein (470aa)
trigger factor n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3514D
trigger factor
Trigger factor {ECO:0000313|EMBL:AEK45390.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
A3-16-all-fractions_k255_5611285_24
Rhodococcus sp. JVH1, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23331..23978
DNA (648bp) protein (216aa)
clpP; ATP-dependent Clp protease proteolytic subunit (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=745408 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. JVH1.;"
ATP-dependent Clp protease ClpP n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3AAA2
A3-16-all-fractions_k255_5611285_25
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24003..24659
DNA (657bp) protein (219aa)
endopeptidase Clp (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7A854
A3-16-all-fractions_k255_5611285_26
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24915..26216
DNA (1302bp) protein (434aa)
ATP-dependent protease n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B445FB
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
ATP-dependent protease ATP-binding subunit
Displaying 26 items

View Taxonomy