ggKbase home page

A3-16-all-fractions_k255_6591488

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_6591488_1
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(55..879)
DNA (825bp) protein (275aa)
ATP synthase F1 subunit delta n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B51BE9
ATP synthase subunit delta
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
A3-16-all-fractions_k255_6591488_2
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(876..1418)
DNA (543bp) protein (181aa)
atpF; ATP synthase, subunit b, F0 sector (EC:3.6.3.14)
F0F1 ATP synthase subunit B n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B426A9
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
A3-16-all-fractions_k255_6591488_3
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1422..1682)
DNA (261bp) protein (87aa)
F0F1 ATP synthase subunit C (EC:3.6.3.14)
F0F1 ATP synthase subunit C n=1 Tax=Nocardioides sp. Iso805N RepID=UPI00036AA852
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
A3-16-all-fractions_k255_6591488_4
Gordonia sputi, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1747..2496)
DNA (750bp) protein (250aa)
ATP synthase subunit a n=1 Tax=Gordonia sputi NBRC 100414 RepID=H5U0A3_9ACTO
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=1089453 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia sputi NBRC 100414.;"
ATP synthase F0 subunit A
A3-16-all-fractions_k255_6591488_5
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2505..2906)
DNA (402bp) protein (134aa)
ATP synthase I n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ62_PSEUX
ATP synthase I
ATP synthase I {ECO:0000313|EMBL:AEA23912.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
A3-16-all-fractions_k255_6591488_6
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2935..3126)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJ61_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23911.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
A3-16-all-fractions_k255_6591488_7
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3384..4547)
DNA (1164bp) protein (388aa)
UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B33495
family 4 glycosyl transferase
Glycosyl transferase, family 4, conserved region {ECO:0000313|EMBL:ADB76708.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
A3-16-all-fractions_k255_6591488_8
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4544..5212)
DNA (669bp) protein (223aa)
Sua5/YciO/YrdC/YwlC family protein n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8XIB2_NAKMY
Sua5/YciO/YrdC/YwlC family protein
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:ACV78481.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
A3-16-all-fractions_k255_6591488_9
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5372..6202)
DNA (831bp) protein (277aa)
methyltransferase (EC:2.1.1.-)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-(glutamine-N5) MTase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; Protein-glutamine N-methyltransferase PrmC {ECO:0000256|HAMAP-Rule:MF_02126}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
Release factor glutamine methyltransferase n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8SMI5_ACTS5
A3-16-all-fractions_k255_6591488_10
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6199..7266)
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7724D
peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
A3-16-all-fractions_k255_6591488_11
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7359..7577)
DNA (219bp) protein (73aa)
50S ribosomal protein L31 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B376E1
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024.;"
50S ribosomal protein L31
A3-16-all-fractions_k255_6591488_12
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7897..8277
DNA (381bp) protein (127aa)
sugar ABC transporter substrate-binding protein n=1 Tax=Streptomyces viridosporus RepID=UPI0001AEEFCE
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KFF95921.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
ABC-type transporter, substrate-binding lipoprotein, family 1
Displaying 12 items

View Taxonomy