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A3-16-all-fractions_k255_7419213

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_7419213_1
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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3..878
DNA (876bp) protein (292aa)
Integrase family protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AX93_FRADG
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AEH08444.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
A3-16-all-fractions_k255_7419213_2
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(1093..1572)
DNA (480bp) protein (160aa)
cupin n=1 Tax=Actinoplanes globisporus RepID=UPI00035C46FE
Cupin {ECO:0000313|EMBL:KHD78112.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
hypothetical protein
A3-16-all-fractions_k255_7419213_3
Tetrasphaera japonica, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1702..2109
DNA (408bp) protein (136aa)
DNA-binding protein, excisionase family n=1 Tax=Frankia sp. QA3 RepID=I8QST4_9ACTO
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:CCH77187.1}; TaxID=1194083 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera japonica T1-X7.;"
modA; molybdenum binding protein
A3-16-all-fractions_k255_7419213_4
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2106..2861
DNA (756bp) protein (252aa)
molybdate-binding protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6653F
Molybdenum ABC transporter, periplasmic molybdate-binding protein {ECO:0000313|EMBL:EXG79703.1}; Flags: Precursor;; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
molybdenum ABC transporter periplasmic molybdate-binding protein
A3-16-all-fractions_k255_7419213_5
Streptomyces ghanaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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2858..3667
DNA (810bp) protein (270aa)
molybdate ABC transporter permease n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3544A
ABC transporter permease protein {ECO:0000313|EMBL:EFE70751.2}; TaxID=566461 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ghanaensis ATCC 14672.;"
molybdate ABC transporter inner membrane subunit
A3-16-all-fractions_k255_7419213_6
[Cellvibrio] gilvus, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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3664..4722
DNA (1059bp) protein (353aa)
ABC transporter related protein n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A3I3_CELGA
ABC transporter related protein
ABC transporter related protein {ECO:0000313|EMBL:AEI10747.1}; TaxID=593907 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078).;"
A3-16-all-fractions_k255_7419213_7
Intrasporangium calvum, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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4742..4978
DNA (237bp) protein (79aa)
sulfur carrier protein ThiS n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B371FB
sulfur carrier protein ThiS
ThiamineS protein {ECO:0000313|EMBL:ADU49443.1}; TaxID=710696 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 /; NBRC 12989 / 7 KIP).;"
A3-16-all-fractions_k255_7419213_8
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4988..5674)
DNA (687bp) protein (229aa)
saccharopine dehydrogenase n=1 Tax=Streptomyces acidiscabies RepID=UPI000289277A
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AGL13730.1}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
A3-16-all-fractions_k255_7419213_9
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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5743..6318
DNA (576bp) protein (192aa)
TetR family transcriptional regulator n=1 Tax=Streptomyces acidiscabies RepID=UPI000287BA94
regulatory protein TetR
Regulatory protein TetR {ECO:0000313|EMBL:ACL66398.1}; TaxID=455488 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" source="Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258).;"
A3-16-all-fractions_k255_7419213_10
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6324..7058)
DNA (735bp) protein (245aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; EC=3.1.4.17 {ECO:0000256|HAMAP-Rule:MF_00905};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CVA8_PSEUX
metallophosphoesterase
A3-16-all-fractions_k255_7419213_11
Kineococcus radiotolerans, Kineococcus, Kineosporiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7112..7597)
DNA (486bp) protein (162aa)
molecular chaperone DnaJ n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B72C78
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS02448.1}; TaxID=266940 species="Bacteria; Actinobacteria; Kineosporiales; Kineosporiaceae; Kineococcus.;" source="Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 /; SRS30216).;"
A3-16-all-fractions_k255_7419213_12
unknown

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7878..8090
DNA (213bp) protein (71aa)

This feature has no annotations

A3-16-all-fractions_k255_7419213_13
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8108..8380
DNA (273bp) protein (91aa)
acylphosphatase (EC:3.6.1.7)
Acylphosphatase n=2 Tax=Saccharomonospora azurea RepID=H8GAJ2_9PSEU
Acylphosphatase {ECO:0000256|SAAS:SAAS00255930}; TaxID=882081 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea NA-128.;"
A3-16-all-fractions_k255_7419213_14
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8382..8792)
DNA (411bp) protein (137aa)
Putative F420-dependent enzyme n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8AVU3_FRADG
putative F420-dependent protein
Putative F420-dependent enzyme {ECO:0000313|EMBL:AEH08281.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbiont subsp. Datisca glomerata.;"
A3-16-all-fractions_k255_7419213_15
Gordonia soli, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8794..9213)
DNA (420bp) protein (140aa)
succinyl-CoA ligase subunit alpha n=1 Tax=Nocardia sp. 348MFTsu5.1 RepID=UPI000368F8E7
Uncharacterized protein {ECO:0000313|EMBL:GAC66990.1}; TaxID=1223545 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia soli NBRC 108243.;"
CoA-binding protein
A3-16-all-fractions_k255_7419213_16
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9238..9768
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0GWU8_ACTM4
hypothetical protein
Prolyl-tRNA synthetase {ECO:0000313|EMBL:KHD76367.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
A3-16-all-fractions_k255_7419213_17
Mycobacterium xenopi, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9772..10239)
DNA (468bp) protein (156aa)
MerR family transcriptional regulator n=1 Tax=Mycobacterium xenopi RIVM700367 RepID=I0RNJ3_MYCXE
MerR family transcriptional regulator {ECO:0000313|EMBL:EID12696.1}; TaxID=1150591 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium xenopi RIVM700367.;"
redox-sensitive transcriptional activator SoxR
A3-16-all-fractions_k255_7419213_18
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10264..10989
DNA (726bp) protein (242aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PQH1_KRIFD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADB29158.1}; Flags: Precursor;; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399).;"
A3-16-all-fractions_k255_7419213_19

Not on your lists

10986..11156
DNA (171bp) protein (57aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|SAAS:SAAS00094434};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Queuosine biosynthesis protein n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J490_FRASU
putative S-adenosylmethionine:tRNA ribosyltransferase-isomerase
Displaying 19 items

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