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A3-16-all-fractions_k255_7555956

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_7555956_1
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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1..318
DNA (318bp) protein (106aa)
Translation initiation factor IF-2 n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F298_MODMB
infB; hypothetical protein
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
A3-16-all-fractions_k255_7555956_2
Streptomyces sp. WM6386, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

348..647
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Streptomyces sp. R1-NS-10 RepID=UPI000378D5D4
Uncharacterized protein {ECO:0000313|EMBL:KKD05174.1}; TaxID=1415558 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. WM6386.;"
hypothetical protein
A3-16-all-fractions_k255_7555956_3
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

671..1108
DNA (438bp) protein (146aa)
ribosome-binding factor A n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B45035
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000256|HAMAP-Rule:MF_00003, ECO:0000256|SAAS:SAAS00023386}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces violaceusniger Tu 4113.;"
A3-16-all-fractions_k255_7555956_4
unknown

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1249..2283
DNA (1035bp) protein (345aa)

This feature has no annotations

A3-16-all-fractions_k255_7555956_5
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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2280..3581
DNA (1302bp) protein (434aa)
multidrug transporter MatE n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3C85C
Multidrug transporter MatE {ECO:0000313|EMBL:KHD73136.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
dinF; MATE efflux family protein
A3-16-all-fractions_k255_7555956_6
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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3591..4502
DNA (912bp) protein (304aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC; 102104 / LLR-40K-21).;"
tRNA pseudouridine synthase B n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3QAV4_STANL
tRNA pseudouridine synthase B
A3-16-all-fractions_k255_7555956_7
Nocardioidaceae bacterium Broad-1, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

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4513..5622
DNA (1110bp) protein (370aa)
Aminoglycoside phosphotransferase n=1 Tax=Frankia sp. CN3 RepID=G6HKC9_9ACTO
FtsQ {ECO:0000313|EMBL:EGD43584.1}; TaxID=408672 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae.;" source="Nocardioidaceae bacterium Broad-1.;"
hypothetical protein
A3-16-all-fractions_k255_7555956_8
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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5632..6585
DNA (954bp) protein (318aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora aurantiaca (strain ATCC 27029 / DSM 43813 / JCM 10878 /; NBRC 16125 / INA 9442).;"
riboflavin kinase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3B36E
riboflavin biosynthesis protein ribf
A3-16-all-fractions_k255_7555956_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6596..7078)
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LPA2_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EXG80952.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
hypothetical protein
A3-16-all-fractions_k255_7555956_10
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7111..7473)
DNA (363bp) protein (121aa)
Chemotaxis protein cheY, Signal transduction response regulator, receiver region n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F5H0_MODMB
Histidine kinase {ECO:0000313|EMBL:KGH46445.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
cheY; chemotaxis protein cheY, Signal transduction response regulator, receiver region
A3-16-all-fractions_k255_7555956_11
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7473..7976)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WBJ8_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ46367.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
A3-16-all-fractions_k255_7555956_12
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7973..8359)
DNA (387bp) protein (129aa)
Putative response regulator receiver domain protein CheY n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0HIN4_ACTM4
cheY1-2; putative response regulator receiver domain protein CheY
Putative response regulator receiver domain protein CheY {ECO:0000313|EMBL:BAL92871.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
A3-16-all-fractions_k255_7555956_13
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8362..9210)
DNA (849bp) protein (283aa)
chemotaxis protein CheR n=1 Tax=Actinoplanes globisporus RepID=UPI00037527D2
Methylase of chemotaxis methyl-accepting protein {ECO:0000313|EMBL:EXG80948.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
CheR-type MCP methyltransferase
A3-16-all-fractions_k255_7555956_14
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9207..10307)
DNA (1101bp) protein (367aa)
response regulator receiver modulated CheB methylesterase (EC:3.1.1.61)
Chemotaxis response regulator protein-glutamate methylesterase {ECO:0000256|HAMAP-Rule:MF_00099}; EC=3.1.1.61 {ECO:0000256|HAMAP-Rule:MF_00099};; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
Chemotaxis response regulator protein-glutamate methylesterase n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WJN6_ACTMD
A3-16-all-fractions_k255_7555956_15
Actinotalea fermentans, Actinotalea, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10362..12029)
DNA (1668bp) protein (556aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Cellvibrio gilvus (strain ATCC 13127 / NRRL B-14078) RepID=F8A5Z2_CELGA
Chemotaxis protein {ECO:0000313|EMBL:KGM15280.1}; Flags: Fragment;; TaxID=862422 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Actinotalea.;" source="Actinotalea fermentans ATCC 43279 = JCM 9966 = DSM 3133.;"
methyl-accepting chemotaxis sensory transducer
A3-16-all-fractions_k255_7555956_16
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12116..12532)
DNA (417bp) protein (139aa)
CheW protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SMR8_NOCSJ
CheW protein
CheW protein {ECO:0000313|EMBL:ABL83103.1}; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
A3-16-all-fractions_k255_7555956_17
Nocardioides sp. JS614, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12529..13962)
DNA (1434bp) protein (478aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=196162 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. (strain BAA-499 / JS614).;"
ATP-binding region, ATPase domain protein n=1 Tax=Nocardioides sp. (strain BAA-499 / JS614) RepID=A1SMR9_NOCSJ
ATPase domain-containing protein
Displaying 17 items

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