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A3-16-all-fractions_k255_5995207_15

Organism: A3-16-all-fractions_metab_conc_22

partial RP 28 / 55 MC: 2 BSCG 33 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(10481..11080)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B49E85 similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 187.0
  • Bit_score: 307
  • Evalue 9.70e-81
RNA polymerase sigma70 factor {ECO:0000313|EMBL:KGH45468.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.1
  • Coverage: 188.0
  • Bit_score: 287
  • Evalue 1.50e-74
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 189.0
  • Bit_score: 285
  • Evalue 1.10e-74

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Taxonomy

Modestobacter sp. KNN45-2b → Modestobacter → Geodermatophilales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 600
ATGGTGACGGCGATGACCGCCGAGGCTGCGGCCCAGTTCGACGCGTGGGTGCCGCCCACGTGGGACGAGGTCGTGCGCGAACACGCCGACCGGGTCTACCGCCTGGCGTTCCGCCTCTCCGGCAACCGCGCCGACGCCGAGGACCTCACCCAGGAGACGTTCGTCCGGGTGTTCCGCTCCCTCGCCCAGTACTCGCCGGGCACGTTCGAGGGCTGGCTGCACCGAATCACGACGAACCTGTTCCTGGACATGGTCCGGCGCCGGCAGCGCATCCGGTTCGACGCGCTGCCCGAGGACGCCGGTGACCGCCTGGCGGGCAGCGACCCGGGCCCGGAGCAGGCCTACGACGAGATGCACCTCGACCCGGAGATCCAGGCCGCGCTGGACGCGCTGCCGCCGGACTTCCGGGTGGCCGTCGTCCTGTGCGACCTCGAACAGCTCTCGTACGAGGAGATCGCCGCGACCTTGGGCATCAAGGTCGGCACCGTCCGTTCCCGCATCCACCGCGGCCGCGTGCTGCTGCGCCAGGCGCTTGCCCACCGGGCGCCGGGCGTGCGCCCGCACGAACCGCTCGACGCCGTTGAGGCCCTGGAGGCATGA
PROTEIN sequence
Length: 200
MVTAMTAEAAAQFDAWVPPTWDEVVREHADRVYRLAFRLSGNRADAEDLTQETFVRVFRSLAQYSPGTFEGWLHRITTNLFLDMVRRRQRIRFDALPEDAGDRLAGSDPGPEQAYDEMHLDPEIQAALDALPPDFRVAVVLCDLEQLSYEEIAATLGIKVGTVRSRIHRGRVLLRQALAHRAPGVRPHEPLDAVEALEA*