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A3-16-all-fractions_k255_5995207

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_5995207_1
Pimelobacter simplex, Pimelobacter, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..730
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Actinomadura atramentaria RepID=UPI0003602C01
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY18208.1}; TaxID=2045 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Pimelobacter.;" source="Nocardioides simplex (Arthrobacter simplex).;"
A3-16-all-fractions_k255_5995207_2
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(720..1844)
DNA (1125bp) protein (375aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036BA490
Uncharacterized protein {ECO:0000313|EMBL:KDN19383.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
hypothetical protein
A3-16-all-fractions_k255_5995207_3
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1860..2225)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Amycolatopsis nigrescens RepID=UPI0003741677
hypothetical protein
Glyoxalase {ECO:0000313|EMBL:AIR43710.1}; TaxID=319705 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subsp. bolletii.;"
A3-16-all-fractions_k255_5995207_4
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

2315..3292
DNA (978bp) protein (326aa)
Helix-turn-helix type 11 domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3I5_SPHTD
helix-turn-helix type 11 domain-containing protein
Helix-turn-helix type 11 domain protein {ECO:0000313|EMBL:ACZ38802.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="Sphaerobacter thermophilus (strain DSM 20745 / S 6022).;"
A3-16-all-fractions_k255_5995207_5
unknown

Not on your lists

comp(3283..3504)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B37FDA
A3-16-all-fractions_k255_5995207_6
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3501..4427)
DNA (927bp) protein (309aa)
Mycothiol S-conjugate amidase {ECO:0000256|HAMAP-Rule:MF_01482}; EC=3.5.1.115 {ECO:0000256|HAMAP-Rule:MF_01482};; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. ATCC 39149.;"
GlcNAc-PI de-N-acetylase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B370A5
hypothetical protein
A3-16-all-fractions_k255_5995207_7
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4573..5070
DNA (498bp) protein (166aa)
transcription elongation factor GreA n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B57C1B
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00003926}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
A3-16-all-fractions_k255_5995207_8
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5085..5393)
DNA (309bp) protein (103aa)
branched-chain amino acid transport n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3CA96
branched-chain amino acid transport
Branched-chain amino acid transport {ECO:0000313|EMBL:ACY98453.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 /; NCIMB 10081).;"
A3-16-all-fractions_k255_5995207_9
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5390..6055)
DNA (666bp) protein (222aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B57AA5
AzlC family protein
AzlC family protein {ECO:0000313|EMBL:ACZ85842.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 /; NI 9100).;"
A3-16-all-fractions_k255_5995207_10
Frankia sp. EuI1c, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6052..6534)
DNA (483bp) protein (161aa)
MarR family transcriptional regulator n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B7291E
MarR family transcriptional regulator
Regulatory protein MarR {ECO:0000313|EMBL:ADP78806.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI1c).;"
A3-16-all-fractions_k255_5995207_11
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6564..7691
DNA (1128bp) protein (376aa)
sodium:proton antiporter n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3EAF0
Protein mrp homolog {ECO:0000313|EMBL:CCH68600.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
hypothetical protein
A3-16-all-fractions_k255_5995207_12
Frankia alni, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7688..8206)
DNA (519bp) protein (173aa)
preprotein translocase subunit TatB n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B79D25
sec-independent translocase
Sec-independent protein translocase protein TatB {ECO:0000256|HAMAP-Rule:MF_00237, ECO:0000256|SAAS:SAAS00028234}; TaxID=326424 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia alni (strain ACN14a).;"
A3-16-all-fractions_k255_5995207_13
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8219..9811)
DNA (1593bp) protein (531aa)
peptidase S1 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B39EA7
peptidase S1 and S6 chymotrypsin/Hap
Peptidase S1 and S6 chymotrypsin/Hap {ECO:0000313|EMBL:ADB73884.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
A3-16-all-fractions_k255_5995207_14
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9897..10484)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5160E
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA23280.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM; 13855 / CB1190).;"
A3-16-all-fractions_k255_5995207_15
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10481..11080)
DNA (600bp) protein (200aa)
RNA polymerase subunit sigma-24 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B49E85
RNA polymerase sigma70 factor {ECO:0000313|EMBL:KGH45468.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
ECF subfamily RNA polymerase sigma-24 subunit
A3-16-all-fractions_k255_5995207_16
Streptomyces clavuligerus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11154..12554
DNA (1401bp) protein (467aa)
glutamate decarboxylase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B649D6
Pyridoxal-dependent decarboxylase {ECO:0000313|EMBL:EFG04806.2}; TaxID=443255 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces clavuligerus (strain ATCC 27064 / DSM 738 / JCM 4710 /; NBRC 13307 / NCIMB 12785 / NRRL 3585 / VKM Ac-602).;"
pyridoxal-dependent decarboxylase
A3-16-all-fractions_k255_5995207_17
Nocardioides sp. CF8, Nocardioides, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12598..13224
DNA (627bp) protein (209aa)
O-methyltransferase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B556CF
O-methyltransferase family protein {ECO:0000313|EMBL:EON24976.1}; TaxID=110319 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Nocardioides.;" source="Nocardioides sp. CF8.;"
O-methyltransferase family protein
A3-16-all-fractions_k255_5995207_18
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13230..13508
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3B1BE
Uncharacterized protein {ECO:0000313|EMBL:AHY60460.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhizophila.;"
hypothetical protein
A3-16-all-fractions_k255_5995207_19
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13518..14123
DNA (606bp) protein (202aa)
cofD; 2-phospho-L-lactate transferase (EC:2.7.8.-)
LPPG:FO 2-phospho-L-lactate transferase {ECO:0000313|EMBL:CCH90083.1}; EC=2.7.8.- {ECO:0000313|EMBL:CCH90083.1};; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
LPPG:FO 2-phospho-L-lactate transferase n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F370_MODMB
Displaying 19 items

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