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A3-16-all-fractions_k255_1801253_30

Organism: A3-16-all-fractions_metab_conc_22

partial RP 28 / 55 MC: 2 BSCG 33 / 51 MC: 4 ASCG 10 / 38 MC: 2
Location: comp(24011..24898)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B47A7B similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 302.0
  • Bit_score: 297
  • Evalue 8.70e-78
putative RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 53.0
  • Coverage: 281.0
  • Bit_score: 272
  • Evalue 8.50e-71
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:BAL91648.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.0
  • Coverage: 281.0
  • Bit_score: 272
  • Evalue 4.20e-70

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Taxonomy

Actinoplanes missouriensis → Actinoplanes → Micromonosporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGACTGCCCTCCCCCGCTCGTCGTCCCCGTCCGAAGCCGCCGCGACCGCCGCTTCCCGTGAGCTGGACGAGCTCGTCCGCAGCCACCTCCCGCTCGTCGGCCACATCGTCCGCGAGACGCTGGCCCGCGTCCCTTCTTATGTCTGCCGCGACGACCTCGTCTCGGCCGGCATGTACGCCCTCGTGCTGAGCGCCCGCAGCTTCGACGCCGAGCGGGGCGTGCCGTTCGGCCGCTTCGCGGCGATCCGCATCCGCGGCGCGATCACCGATGAACTGCGCTCCATGGACTGGGCCTCCCGCGCCGTCCGCGGCCGGGCCCGCACCATCGAGAGCGTCCGCAGCGAGCTGGCGGCCACCCTGGGCCGCTCGGCCACCCGCGACGAGGTGGCGCAGACCCTGGGCATGTCGCCGGCCGAGGTCGAAGCGGCCGACGCCGACGTGCAGCGGGCCTCCGTACTGTCCCTCCAGTCGCTGGACACCGAGGACGGCGCCGGCCTGCTCCCGTCCACCGGCGGCACGCCGGAGGCGACCATCATGATGCGCGAGCAGATCGGCTACCTGCGCGACGCGATCGCCGAGCTGCCCGACCGCCTGCGCACCGTGGTACAGCAGTACTTCTTCGAGCAGCGCAAGATGTCCGACATCGCCGCCGACTTCGGCGTGACGGAGTCCCGGGTGTCGCAGATGCGGGCCGAGGCCCTGACGCTGCTGCGCGCGGCCGTCCGGGGCATGGACGAGCCGCCGGTGGAGCAGGCCACCACGACCCGCCGTCAAGCCGCCGCCCAGGCGAGCTACTGCGCGGCTGTGGCCACCCGCTCGACCCTGGCCGGCCGCCTCGCGCAGACCACCCTGCGCGGCGAGCCGCTGCCGATGCGGGATGCCGGCTGA
PROTEIN sequence
Length: 296
MTALPRSSSPSEAAATAASRELDELVRSHLPLVGHIVRETLARVPSYVCRDDLVSAGMYALVLSARSFDAERGVPFGRFAAIRIRGAITDELRSMDWASRAVRGRARTIESVRSELAATLGRSATRDEVAQTLGMSPAEVEAADADVQRASVLSLQSLDTEDGAGLLPSTGGTPEATIMMREQIGYLRDAIAELPDRLRTVVQQYFFEQRKMSDIAADFGVTESRVSQMRAEALTLLRAAVRGMDEPPVEQATTTRRQAAAQASYCAAVATRSTLAGRLAQTTLRGEPLPMRDAG*