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A3-16-all-fractions_k255_1801253

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_1801253_1
Cellulomonas fimi, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..538)
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GZB4_CELFA
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEE44835.1}; TaxID=590998 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513; / NCIMB 8980 / NCTC 7547).;"
A3-16-all-fractions_k255_1801253_2
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(513..2558)
DNA (2046bp) protein (682aa)
flagellar biosynthesis protein FlhA n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B53F82
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:EXG80957.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
flhA; Flagellar biosynthesis protein flhA
A3-16-all-fractions_k255_1801253_3
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2673..3779)
DNA (1107bp) protein (369aa)
type III secretion protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B58412
Type III secretion protein {ECO:0000313|EMBL:KHD72548.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
flhB; Flagellar biosynthetic protein flhB
A3-16-all-fractions_k255_1801253_4
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3776..4537)
DNA (762bp) protein (254aa)
flagellar biosynthesis protein FliR n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B79F47
type III secretion system inner membrane R protein
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
A3-16-all-fractions_k255_1801253_5
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4540..4809)
DNA (270bp) protein (90aa)
Flagellar biosynthetic protein FliQ n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LT71_ACIC1
flagellar biosynthetic protein FliQ
Flagellar biosynthetic protein FliQ {ECO:0000313|EMBL:ABK52631.1}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
A3-16-all-fractions_k255_1801253_6
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4814..5671)
DNA (858bp) protein (286aa)
fliP; flagellar biosynthesis protein FliP (EC:3.1.1.3)
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:ACU36271.1}; EC=3.1.1.3 {ECO:0000313|EMBL:ACU36271.1};; Flags: Precursor;; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
flagellar biosynthesis protein FliP n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4D0BF
A3-16-all-fractions_k255_1801253_7
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5679..6161)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B6DCB7
Flagellar biosynthetic protein FliO {ECO:0000313|EMBL:EXG80963.1}; Flags: Precursor;; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
fliO; flagellar protein FliO/FliZ
A3-16-all-fractions_k255_1801253_8
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6165..6893)
DNA (729bp) protein (243aa)
Flagellar motor switch protein FliN n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5WE98_9ACTO
fliN; Flagellar motor switch protein FliN
Flagellar motor switch protein FliN {ECO:0000313|EMBL:AGZ46355.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
A3-16-all-fractions_k255_1801253_9
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6890..7837)
DNA (948bp) protein (316aa)
Flagellar motor switch protein FliM n=1 Tax=Actinoplanes sp. N902-109 RepID=R4LP90_9ACTO
Flagellar motor switch protein {ECO:0000313|EMBL:EXG80965.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
fliM; flagellar motor switch protein FliM
A3-16-all-fractions_k255_1801253_10
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7942..8424)
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Actinokineospora enzanensis RepID=UPI00036ECC1D
flagellar basal body-associated protein FliL
Flagellar basal body-associated protein FliL {ECO:0000313|EMBL:ACU36275.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
A3-16-all-fractions_k255_1801253_11
Actinoplanes utahensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8437..9345)
DNA (909bp) protein (303aa)
flagellar motor protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B698B3
Flagellar motor protein {ECO:0000313|EMBL:KHD72541.1}; TaxID=1869 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes utahensis.;"
Chemotaxis protein motB
A3-16-all-fractions_k255_1801253_12
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9345..10121)
DNA (777bp) protein (259aa)
flagellar motor protein MotA n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B526E6
Chemotaxis protein motA
Chemotaxis protein motA {ECO:0000313|EMBL:AEV88802.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
A3-16-all-fractions_k255_1801253_13
Cellulomonas carbonis, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10121..10423)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Sporichthya polymorpha RepID=UPI000370D28D
flagellar FlbD family protein
Flagellar protein FlbD {ECO:0000313|EMBL:KGM08848.1}; TaxID=947969 species="Bacteria; Actinobacteria; Micrococcales; Cellulomonadaceae; Cellulomonas.;" source="Cellulomonas carbonis T26.;"
A3-16-all-fractions_k255_1801253_14
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10527..11330)
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B2E332
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU36279.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
A3-16-all-fractions_k255_1801253_15
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11379..11837)
DNA (459bp) protein (153aa)
flagellar hook capping protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B3CBAD
flagellar hook capping protein
Flagellar hook capping protein {ECO:0000313|EMBL:ABK52621.1}; Flags: Precursor;; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain ATCC 43068 / 11B).;"
A3-16-all-fractions_k255_1801253_16
Leishmania major, Leishmania, Kinetoplastida, Eukaryota

Not on your lists

comp(11872..13440)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Leishmania major RepID=E9AEK6_LEIMA
Uncharacterized protein {ECO:0000313|EMBL:CBZ12659.1}; TaxID=5664 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Leishmaniinae; Leishmania.;" source="Leishmania major.;"
YD repeat-containing protein
A3-16-all-fractions_k255_1801253_17
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13446..14417)
DNA (972bp) protein (324aa)
Lytic transglycosylase catalytic n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WJQ7_ACTMD
lytic transglycosylase
Lytic transglycosylase catalytic {ECO:0000313|EMBL:ACU36282.1}; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
A3-16-all-fractions_k255_1801253_18
unknown

Not on your lists

comp(14414..14863)
DNA (450bp) protein (150aa)

This feature has no annotations

A3-16-all-fractions_k255_1801253_19
Actinosynnema mirum, Actinosynnema, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14860..16203)
DNA (1344bp) protein (448aa)
FliI/YscN family ATPase (EC:3.6.3.15)
ATPase, FliI/YscN family {ECO:0000313|EMBL:ACU36284.1}; EC=3.6.3.15 {ECO:0000313|EMBL:ACU36284.1};; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Actinosynnema.;" source="Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU; 3971).;"
ATP synthase n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B749AF
A3-16-all-fractions_k255_1801253_20
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16200..16862)
DNA (663bp) protein (221aa)
Flagellar assembly protein FliH n=1 Tax=Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110) RepID=G8S7M6_ACTS5
fliH; flagellar assembly protein FliH
Flagellar assembly protein FliH {ECO:0000313|EMBL:AEV88786.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 31044 / CBS 674.73 / SE50/110).;"
A3-16-all-fractions_k255_1801253_21
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16846..17907)
DNA (1062bp) protein (354aa)
flagellar motor switch protein FliG n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B37231
Flagellar motor switch protein FliG {ECO:0000313|EMBL:EXG80977.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
fliG; Flagellar motor switch protein fliG
A3-16-all-fractions_k255_1801253_22
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17913..19514)
DNA (1602bp) protein (534aa)
flagellar M-ring protein FliF n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B505A8
fliF; flagellar basal-body M-ring protein/flagellar hook-basal body protein FliF
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain BC501).;"
A3-16-all-fractions_k255_1801253_23
Actinoplanes sp. N902-109, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19514..19822)
DNA (309bp) protein (103aa)
flagellar hook-basal body protein FliE n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5AF5C
flagellar hook-basal body complex subunit FliE
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=649831 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. N902-109.;"
A3-16-all-fractions_k255_1801253_24
Arthrobacter chlorophenolicus, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19826..20233)
DNA (408bp) protein (136aa)
flagellar basal body rod protein FlgG n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B5763E
flagellar basal-body rod protein FlgC
Flagellar basal-body rod protein FlgC {ECO:0000313|EMBL:ACL40954.1}; TaxID=452863 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter chlorophenolicus (strain ATCC 700700 / DSM 12829 / JCM; 12360 / NCIMB 13794 / A6).;"
A3-16-all-fractions_k255_1801253_25
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20239..20580)
DNA (342bp) protein (114aa)
flagellar basal-body rod protein FlgB n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B4E412
flagellar basal-body rod protein FlgB
Flagellar basal body rod protein FlgB {ECO:0000256|PIRNR:PIRNR002889}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 /; G-20).;"
A3-16-all-fractions_k255_1801253_26
unknown

Not on your lists

comp(20723..21118)
DNA (396bp) protein (132aa)

This feature has no annotations

A3-16-all-fractions_k255_1801253_27
Modestobacter sp. KNN45-2b, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21130..21528)
DNA (399bp) protein (133aa)
Flagellar protein FliS n=1 Tax=Cellulomonas fimi (strain ATCC 484 / DSM 20113 / JCM 1341 / NBRC 15513 / NCIMB 8980 / NCTC 7547) RepID=F4GYT7_CELFA
Flagellar biosynthesis protein FliS {ECO:0000313|EMBL:KGH48486.1}; TaxID=1522368 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter sp. KNN45-2b.;"
flagellar protein FliS
A3-16-all-fractions_k255_1801253_28
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21556..22890)
DNA (1335bp) protein (445aa)
hypothetical protein n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B549A2
Flagellar capping protein {ECO:0000313|EMBL:EXG80984.1}; Flags: Precursor;; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
flagellar hook-associated 2 domain-containing protein
A3-16-all-fractions_k255_1801253_29
Cryptosporangium arvum, Cryptosporangium, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22996..23880)
DNA (885bp) protein (295aa)
flagellin n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B457C2
Flagellin/flagellar hook associated protein {ECO:0000313|EMBL:EXG80985.1}; TaxID=927661 species="Bacteria; Actinobacteria; Frankiales; Cryptosporangiaceae; Cryptosporangium.;" source="Cryptosporangium arvum DSM 44712.;"
flagellin
A3-16-all-fractions_k255_1801253_30
Actinoplanes missouriensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24011..24898)
DNA (888bp) protein (296aa)
RNA polymerase sigma 70 n=1 Tax=Frankia sp. Iso899 RepID=UPI0003B47A7B
putative RNA polymerase sigma factor
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:BAL91648.1}; TaxID=512565 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64; / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431).;"
Displaying items 1-30 of 33 in total

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