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A3-16-all-fractions_k255_201894

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_201894_1
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..1106)
DNA (1104bp) protein (368aa)
Putative Zn-dependent protease-like protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WT98_9BURK
Putative Zn-dependent protease-like protein {ECO:0000313|EMBL:EHR68971.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
TldD protein
A3-16-all-fractions_k255_201894_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1252..2244)
DNA (993bp) protein (331aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01877}; rRNA (cytidine-2'-O-)-methyltransferase RsmI {ECO:0000256|HAMAP-Rule:MF_01877}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Tetrapyrrole methylase family protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK80_RUBGI
tetrapyrrole methylase family protein
A3-16-all-fractions_k255_201894_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2279..2686
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034BBB7D
UPF0102 protein RBXJA2T_05093 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
A3-16-all-fractions_k255_201894_4
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2846..3499
DNA (654bp) protein (218aa)
phosphoheptose isomerase (EC:5.3.1.-)
Phosphoheptose isomerase {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089187}; EC=5.3.1.28 {ECO:0000256|HAMAP-Rule:MF_00067, ECO:0000256|SAAS:SAAS00089180};; Sedoheptulose 7-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00067}; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
phosphoheptose isomerase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003493C97
A3-16-all-fractions_k255_201894_5
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3505..4140
DNA (636bp) protein (212aa)
transporter n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B6907F
periplasmic protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_201894_6
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4327..5223)
DNA (897bp) protein (299aa)
garR; 2-hydroxy-3-oxopropionate reductase (EC:1.1.1.60)
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LMW5_9BURK
3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:EGJ09683.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
A3-16-all-fractions_k255_201894_7
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5386..6522)
DNA (1137bp) protein (379aa)
Twitching motility protein PilU n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HK85_RUBGI
pilU; twitching motility protein PilU
Twitching motility protein PilU {ECO:0000313|EMBL:BAL93422.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Displaying 7 items

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