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A3-16-all-fractions_k255_447943

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_447943_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1..1032)
DNA (1032bp) protein (344aa)
histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000313|EMBL:ACS20607.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ACS20607.1};; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
Histidine kinase n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CVV4_VARPS
A3-16-all-fractions_k255_447943_2
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1086..2582)
DNA (1497bp) protein (499aa)
Transporter, SSS family n=2 Tax=Ralstonia RepID=E2STY1_9RALS
Na+/proline symporter {ECO:0000313|EMBL:ENZ76589.1}; TaxID=1264675 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii OR214.;"
sodium:solute symporter
A3-16-all-fractions_k255_447943_3
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2588..2761)
DNA (174bp) protein (58aa)
membrane protein n=1 Tax=Herbaspirillum seropedicae RepID=UPI00031B9254
membrane protein
Membrane protein {ECO:0000313|EMBL:KHQ98527.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
A3-16-all-fractions_k255_447943_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2900..3499)
DNA (600bp) protein (200aa)
Transcriptional regulator, LuxR family n=1 Tax=Variovorax paradoxus B4 RepID=T1XE70_VARPD
transcriptional regulator, LuxR family
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:ACS20606.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A3-16-all-fractions_k255_447943_5

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3663..4253
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Paenibacillus sp. OSY-SE RepID=UPI0003667068
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF49488.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
A3-16-all-fractions_k255_447943_6
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(4398..4901)
DNA (504bp) protein (168aa)
methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
methionine sulfoxide reductase A n=1 Tax=Dyella japonica RepID=UPI0002F795C3
A3-16-all-fractions_k255_447943_7
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4898..5347)
DNA (450bp) protein (150aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22II-S11g.;"
msrB1; methionine sulfoxide reductase B (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Rhodanobacter spathiphylli B39 RepID=I4VWL7_9GAMM
A3-16-all-fractions_k255_447943_8
Dyella jiangningensis, Dyella, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5576..6613)
DNA (1038bp) protein (346aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q025Y5_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHX16300.1}; TaxID=1379159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Dyella.;" source="Dyella jiangningensis.;"
A3-16-all-fractions_k255_447943_9
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6897..7892)
DNA (996bp) protein (332aa)
menaquinone via futalosine step 2 (EC:3.2.2.9)
Menaquinone via futalosine step 2 {ECO:0000313|EMBL:AEK64036.1}; EC=3.2.2.9 {ECO:0000313|EMBL:AEK64036.1};; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
Menaquinone via futalosine step 2 n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0AEA6_COLFT
Displaying 9 items

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