ggKbase home page

A3-16-all-fractions_k255_735974

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_735974_1
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122..1129)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI0002375F23
hypothetical protein
Tax=GWA2_Burkholderiales_64_37_curated
A3-16-all-fractions_k255_735974_2
R_Burkholderiales_67_14, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1198..1803
DNA (606bp) protein (202aa)
TetR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002375F22
TetR family transcriptional regulator
Tax=RifCSPlowO2_12_Burkholderiales_67_14_curated
A3-16-all-fractions_k255_735974_3
Burkholderia sp. MR1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1803..2114
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Pandoraea sp. B-6 RepID=UPI00034AD7B2
Excinuclease ABC C subunit domain protein {ECO:0000313|EMBL:KIG05534.1}; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;"
nuclease
A3-16-all-fractions_k255_735974_4
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2096..3949)
DNA (1854bp) protein (618aa)
Putative ATPase {ECO:0000313|EMBL:KDR95967.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;"
A3-16-all-fractions_k255_735974_5
unknown

Not on your lists

comp(3946..4149)
DNA (204bp) protein (68aa)

This feature has no annotations

A3-16-all-fractions_k255_735974_6
unknown

Not on your lists

comp(4146..4883)
DNA (738bp) protein (246aa)

This feature has no annotations

A3-16-all-fractions_k255_735974_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5072..7228
DNA (2157bp) protein (719aa)
TonB-dependent receptor n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CPQ5_VARPS
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACS17776.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
A3-16-all-fractions_k255_735974_8
unknown

Not on your lists

comp(7294..7668)
DNA (375bp) protein (125aa)

This feature has no annotations

A3-16-all-fractions_k255_735974_9
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8099..9067
DNA (969bp) protein (323aa)
Variovorax paradoxus strain MEDvA23 contig_135, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ16315.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein id=5082161 bin=GWF1_Burkholderiales_GWF1_66_17 species=Methylobacter tundripaludum genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hypothetical protein
A3-16-all-fractions_k255_735974_10
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9178..9759
DNA (582bp) protein (194aa)
hypothetical protein id=5082162 bin=GWF1_Burkholderiales_GWF1_66_17 species=Cellvibrio sp. BR genus=Cellvibrio taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD
hemerythrin hhE cation binding domain-containing protein
Tax=GWE1_Burkholderiales_65_30_curated
A3-16-all-fractions_k255_735974_11
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9947..12574
DNA (2628bp) protein (876aa)
2-oxoglutarate dehydrogenase, E1 component (EC:1.2.4.2)
2-oxoglutarate dehydrogenase, E1 component {ECO:0000313|EMBL:AJK50831.1}; EC=1.2.4.2 {ECO:0000313|EMBL:AJK50831.1};; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI0003460BDC
A3-16-all-fractions_k255_735974_12
Geobacter daltonii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12578..15415)
DNA (2838bp) protein (946aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9LZ98_GEODF
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Sensor diguanylate cyclase/phosphodiesterase, Cache_1, HAMP and PAS domain-containing {ECO:0000313|EMBL:ACM20651.1}; TaxID=316067 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32).;"
A3-16-all-fractions_k255_735974_13
unknown

Not on your lists

comp(15524..16492)
DNA (969bp) protein (323aa)

This feature has no annotations

Displaying 13 items

View Taxonomy