ggKbase home page

A3-16-all-fractions_k255_1069939

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_1069939_1
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

186..1772
DNA (1587bp) protein (529aa)
UPF0061 protein Mpe_A1768 n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SGN8_METPP
hypothetical protein
UPF0061 protein Y694_01343 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
A3-16-all-fractions_k255_1069939_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1885..2526
DNA (642bp) protein (214aa)
Probable intracellular septation protein A n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=YCIB_METPP
intracellular septation protein A
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_1069939_3
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2529..2801
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00037DC22B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL95769.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-16-all-fractions_k255_1069939_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2983..3816
DNA (834bp) protein (278aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
Putative isomerase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HRY1_RUBGI
putative isomerase
A3-16-all-fractions_k255_1069939_5
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3920..4831
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FX40_ISOV2
Uncharacterized protein {ECO:0000313|EMBL:AKF07505.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandaracinus amylolyticus.;"
hypothetical protein
A3-16-all-fractions_k255_1069939_6
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4965..5429
DNA (465bp) protein (155aa)
Papain-like cysteine protease AvrRpt2 n=1 Tax=Methylomicrobium album BG8 RepID=H8GJ11_METAL
Papain-like cysteine protease AvrRpt2 {ECO:0000313|EMBL:EIC31518.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG8.;"
A3-16-all-fractions_k255_1069939_7
GWF1_Spirochaetes_51_8_curated, Spirochaetes, Bacteria

Not on your lists

5506..6531
DNA (1026bp) protein (342aa)
Isoamylase N-terminal domain protein id=2824279 bin=GWF1_Spirochaetes_51_8 species=Prevotella melaninogenica genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
xylanase
Tax=GWF1_Spirochaetes_51_8_curated
A3-16-all-fractions_k255_1069939_8
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6550..7224)
DNA (675bp) protein (225aa)
ThiJ/PfpI domain protein n=1 Tax=Alicyclobacillus acidocaldarius (strain Tc-4-1) RepID=F8ID91_ALIAT
ThiJ/PfpI domain-containing protein
ThiJ/PfpI domain protein {ECO:0000313|EMBL:ACV57675.1}; TaxID=521098 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Alicyclobacillus.;" source="Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC; 27009 / DSM 446 / JCM 5260 / NBRC 15652 / NCIMB 11725 / NRRL B-14509 /; 104-1A) (Bacillus acidocaldarius).;"
A3-16-all-fractions_k255_1069939_9
Enhygromyxa salina, Enhygromyxa, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7298..8512)
DNA (1215bp) protein (405aa)
hypothetical protein n=1 Tax=zeta proteobacterium SCGC AB-602-C20 RepID=UPI00035F066B
Uncharacterized protein {ECO:0000313|EMBL:KIG17128.1}; TaxID=215803 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Enhygromyxa.;" source="Enhygromyxa salina.;"
A3-16-all-fractions_k255_1069939_10
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8598..9281)
DNA (684bp) protein (228aa)
ABC transporter n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003473B56
putative ABC transporter ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAL95757.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-16-all-fractions_k255_1069939_11
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9352..9954
DNA (603bp) protein (201aa)
arylesterase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003499520
GDSL family lipase
Tax=CG_Rhodof_04
A3-16-all-fractions_k255_1069939_12
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9959..11404)
DNA (1446bp) protein (482aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WN58_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:EHR71098.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
hypothetical protein
A3-16-all-fractions_k255_1069939_13
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11563..12099)
DNA (537bp) protein (179aa)
peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I5H8_BORPD
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_1069939_14
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12364..14475)
DNA (2112bp) protein (704aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
DNA ligase (EC:6.5.1.2)
hypothetical protein n=1 Tax=Leeia oryzae RepID=UPI00037F99D1
A3-16-all-fractions_k255_1069939_15
Pseudoalteromonas flavipulchra, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14556..15425)
DNA (870bp) protein (290aa)
Putative uncharacterized protein n=1 Tax=Pseudoalteromonas sp. BSi20311 RepID=G7EXI8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KHM50790.1}; TaxID=1315273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas flavipulchra NCIMB 2033 = ATCC BAA-314.;"
RDD domain-containing protein
A3-16-all-fractions_k255_1069939_16
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15431..16102)
DNA (672bp) protein (224aa)
HAD family hydrolase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9WXV1_9RHIZ
HAD-superfamily hydrolase, subfamily IA
HAD-superfamily hydrolase, subfamily IA {ECO:0000313|EMBL:AIQ91645.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium oryzae CBMB20.;"
A3-16-all-fractions_k255_1069939_17
Rheinheimera sp. A13L, Rheinheimera, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16152..17036)
DNA (885bp) protein (295aa)
Putative hydrolase of alpha/beta superfamily n=1 Tax=Rheinheimera sp. A13L RepID=F7P034_9GAMM
Putative hydrolase of alpha/beta superfamily {ECO:0000313|EMBL:EGM76370.1}; TaxID=506534 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Rheinheimera.;" source="Rheinheimera sp. A13L.;"
esterase
A3-16-all-fractions_k255_1069939_18
unknown

Not on your lists

17103..18059
DNA (957bp) protein (319aa)

This feature has no annotations

A3-16-all-fractions_k255_1069939_19
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18071..18337
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QN33_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EYF04265.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
lanthionine synthetase C-like family protein
A3-16-all-fractions_k255_1069939_20
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18443..18835
DNA (393bp) protein (131aa)
Lanthionine synthetase C-like family protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FXN0_SORC5
lanthionine synthetase C-like family protein
Lanthionine synthetase C-like family protein {ECO:0000313|EMBL:CAN95531.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
A3-16-all-fractions_k255_1069939_21
Burkholderia sp. YI23, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19308..19985)
DNA (678bp) protein (226aa)
Band 7 protein n=1 Tax=Burkholderia sp. YI23 RepID=G8MBM9_9BURK
hypothetical protein
Band 7 protein {ECO:0000313|EMBL:AET91496.1}; TaxID=1097668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. YI23.;"
Displaying 21 items

View Taxonomy