ggKbase home page

A3-16-all-fractions_k255_1579185

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_1579185_1
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

59..541
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SII6_METPP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM95375.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-16-all-fractions_k255_1579185_2
Pseudogulbenkiania ferrooxidans, Pseudogulbenkiania, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(549..1826)
DNA (1278bp) protein (426aa)
Major facilitator superfamily MFS_1 n=1 Tax=Pseudogulbenkiania ferrooxidans 2002 RepID=B9Z4M0_9NEIS
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:EEG08102.1}; TaxID=279714 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Pseudogulbenkiania.;" source="Pseudogulbenkiania ferrooxidans 2002.;"
major facilitator superfamily transporter
A3-16-all-fractions_k255_1579185_3
Dickeya solani, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1931..2824
DNA (894bp) protein (298aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037042E3
Transcriptional regulator YnfL {ECO:0000313|EMBL:ERO57732.1}; TaxID=1231725 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya solani D s0432-1.;"
LysR family transcriptional regulator
A3-16-all-fractions_k255_1579185_4
Burkholderia sp. H160, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2845..3843)
DNA (999bp) protein (333aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; Flags: Precursor;; TaxID=516466 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. H160.;"
peptidylprolyl isomerase; exported protein (EC:5.2.1.8)
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Burkholderia sp. H160 RepID=B5WBR3_9BURK
A3-16-all-fractions_k255_1579185_5
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3840..4583)
DNA (744bp) protein (248aa)
Putative uncharacterized protein n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0QBY3_ACIAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADX48599.1}; Flags: Precursor;; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
A3-16-all-fractions_k255_1579185_6
unknown

Not on your lists

comp(4718..5149)
DNA (432bp) protein (144aa)

This feature has no annotations

A3-16-all-fractions_k255_1579185_7
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5164..5910)
DNA (747bp) protein (249aa)
gpmA; 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans DSM 6575.;"
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWZ4_RUBGI
A3-16-all-fractions_k255_1579185_8
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6007..6429
DNA (423bp) protein (141aa)
Rhodanese domain protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWZ3_RUBGI
rhodanese domain-containing protein
Rhodanese domain protein {ECO:0000313|EMBL:BAL97530.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-16-all-fractions_k255_1579185_9
RLO_Burkholderiales_64_99, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6544..6801
DNA (258bp) protein (86aa)
Glutaredoxin 3 n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LK33_9BURK
grxC; glutaredoxin-3 GrxC
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated
A3-16-all-fractions_k255_1579185_10
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6900..7367
DNA (468bp) protein (156aa)
Protein-export protein SecB n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LK32_9BURK
Protein-export protein SecB {ECO:0000256|HAMAP-Rule:MF_00821}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
secB; preprotein translocase SecB subunit
A3-16-all-fractions_k255_1579185_11
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7478..8461
DNA (984bp) protein (328aa)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00394}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
gpsA; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
glycerol-3-phosphate dehydrogenase n=1 Tax=Ideonella sp. B508-1 RepID=UPI000346036E
A3-16-all-fractions_k255_1579185_12
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8692..9156)
DNA (465bp) protein (155aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
tRNA methyltransferase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034BA6B3
tRNA/rRNA methyltransferase-like protein
A3-16-all-fractions_k255_1579185_13
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9180..9923)
DNA (744bp) protein (248aa)
Putative amidophosphoribosyltransferase n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIV9_9BURK
Putative amidophosphoribosyltransferase {ECO:0000313|EMBL:EHR73015.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;"
phosphoribosyltransferase
A3-16-all-fractions_k255_1579185_14
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9952..10932
DNA (981bp) protein (327aa)
Biotin synthesis protein BioC n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LK27_9BURK
Biotin synthesis protein BioC {ECO:0000313|EMBL:EGJ08695.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
bioC; putative biotin synthesis protein BioC
A3-16-all-fractions_k255_1579185_15
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11139..11756
DNA (618bp) protein (206aa)
ctaC; cytochrome c oxidase subunit 2 CtaC (EC:1.9.3.1)
Cytochrome c oxidase subunit 2 n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HWY6_RUBGI
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
Displaying 15 items

View Taxonomy