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A3-16-all-fractions_k255_1862626

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_1862626_1
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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31..1506
DNA (1476bp) protein (492aa)
NADH dehydrogenase (quinone) (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit M {ECO:0000313|EMBL:EWS55059.1}; EC=1.6.99.5 {ECO:0000313|EMBL:EWS55059.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
NADH dehydrogenase (Quinone) n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFN8_METPP
A3-16-all-fractions_k255_1862626_2
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1526..3007
DNA (1482bp) protein (494aa)
NADH dehydrogenase subunit N (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit N n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SFN9_METPP
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_1862626_3
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3024..3659
DNA (636bp) protein (212aa)
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:EWS55056.1}; EC=3.6.1.13 {ECO:0000313|EMBL:EWS55056.1};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29.;"
ADP-ribose pyrophosphatase (EC:3.6.1.13)
ADP-ribose pyrophosphatase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034D21E3
A3-16-all-fractions_k255_1862626_4
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3670..4134
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPH6_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL94913.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-16-all-fractions_k255_1862626_5
unknown

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comp(4091..4735)
DNA (645bp) protein (215aa)

This feature has no annotations

A3-16-all-fractions_k255_1862626_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4946..6379)
DNA (1434bp) protein (478aa)
Putative oxidoreductase n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LS80_9BURK
putative oxidoreductase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_1862626_7
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6381..6806)
DNA (426bp) protein (142aa)
membrane protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B40F1A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB83848.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
A3-16-all-fractions_k255_1862626_8
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6814..8061
DNA (1248bp) protein (416aa)
ribonuclease BN transmembrane protein (EC:3.1.-.-)
UPF0761 membrane protein Mpe_A1422 n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=Y1422_METPP
UPF0761 membrane protein Mpe_A1422 {ECO:0000255|HAMAP-Rule:MF_00672}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-16-all-fractions_k255_1862626_9
Collimonas arenae, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8177..8755)
DNA (579bp) protein (193aa)
DNA-binding protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI000348826B
Transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AIY41204.1}; TaxID=279058 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas arenae.;"
A3-16-all-fractions_k255_1862626_10
Cupriavidus metallidurans, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8885..10096
DNA (1212bp) protein (404aa)
kbl; 2-amino-3-ketobutyrate CoA ligase (EC:2.3.1.29)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00985}; TaxID=266264 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839).;"
2-amino-3-ketobutyrate CoA ligase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034A473F
A3-16-all-fractions_k255_1862626_11
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10093..11055
DNA (963bp) protein (321aa)
NAD-dependent epimerase n=1 Tax=Ideonella sp. B508-1 RepID=UPI000344910D
NAD-dependent epimerase/dehydratase
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_1862626_12
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11217..11546)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YA02_9BURK
Putative uncharacterized protein {ECO:0000313|EMBL:CBA28916.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacter.;" source="Curvibacter putative symbiont of Hydra magnipapillata.;"
membrane protein
A3-16-all-fractions_k255_1862626_13
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11574..12374)
DNA (801bp) protein (267aa)
Alpha/beta hydrolase fold n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPI5_RUBGI
alpha/beta hydrolase
Alpha/beta hydrolase fold {ECO:0000313|EMBL:BAL94922.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-16-all-fractions_k255_1862626_14
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12371..13714)
DNA (1344bp) protein (448aa)
O-acetylhomoserine aminocarboxypropyltransferase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase {ECO:0000313|EMBL:BAL94923.1}; EC=2.5.1.49 {ECO:0000313|EMBL:BAL94923.1};; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
O-acetylhomoserine aminocarboxypropyltransferase n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPI6_RUBGI
A3-16-all-fractions_k255_1862626_15
Aquabacterium sp. NJ1, Aquabacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13800..14264
DNA (465bp) protein (155aa)
XRE family transcriptional regulator n=1 Tax=Ideonella sp. B508-1 RepID=UPI000348D477
Uncharacterized protein {ECO:0000313|EMBL:KGM39458.1}; TaxID=1538295 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Aquabacterium.;" source="Aquabacterium sp. NJ1.;"
hypothetical protein
A3-16-all-fractions_k255_1862626_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14376..16730)
DNA (2355bp) protein (785aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) id=1320913 bin=GWE1_T_denit_62_9 species=Candidatus Accumulibacter phosphatis genus=Candidatus Accumulibacter taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
Tax=GWE1_Thiobacillus_62_9_curated
A3-16-all-fractions_k255_1862626_17
Leptothrix cholodnii, Leptothrix, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16923..18029
DNA (1107bp) protein (369aa)
chorismate synthase (EC:4.2.3.5)
Chorismate synthase {ECO:0000255|HAMAP-Rule:MF_00300}; Short=CS {ECO:0000255|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000255|HAMAP-Rule:MF_00300};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000255|HAMAP-Rule:MF_00300}; TaxID=395495 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Leptothrix.;" source="Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) (Leptothrix; discophora (strain SP-6)).;"
Chorismate synthase n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=AROC_LEPCP
A3-16-all-fractions_k255_1862626_18
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18247..19446
DNA (1200bp) protein (400aa)
Secretion protein HlyD family protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPJ1_RUBGI
secretion protein HlyD family protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
A3-16-all-fractions_k255_1862626_19
R_Betaproteobacteria_67_19, Betaproteobacteria, Proteobacteria, Bacteria

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19487..19645
DNA (159bp) protein (53aa)
nodulation protein NolG n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003459699
transporter, AcrB/D/F family protein
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_67_19_curated
Displaying 19 items

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