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A3-16-all-fractions_k255_2490375

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
A3-16-all-fractions_k255_2490375_1
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1..843
DNA (843bp) protein (281aa)
Putative flagellar biosynthesis-related protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPW7_RUBGI
putative flagellar biosynthesis-related protein
Putative flagellar biosynthesis-related protein {ECO:0000313|EMBL:BAL95054.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-16-all-fractions_k255_2490375_2
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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864..1577
DNA (714bp) protein (238aa)
RNA polymerase sigma factor FliA n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPW8_RUBGI
filA; RNA polymerase sigma factor for flagellar operon FliA
RNA polymerase sigma factor FliA {ECO:0000256|HAMAP-Rule:MF_00962}; RNA polymerase sigma factor for flagellar operon {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma F {ECO:0000256|HAMAP-Rule:MF_00962}; Sigma-28 {ECO:0000256|HAMAP-Rule:MF_00962}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-16-all-fractions_k255_2490375_3
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1986..2996
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNB8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ09836.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
A3-16-all-fractions_k255_2490375_4
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2993..3931
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LNB8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ09836.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
hypothetical protein
A3-16-all-fractions_k255_2490375_5
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

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comp(3950..4204)
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003627AB9
Transglycosylase-associated protein {ECO:0000313|EMBL:EDY18826.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
hypothetical protein
A3-16-all-fractions_k255_2490375_6
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4422..4967
DNA (546bp) protein (182aa)
Putative signal peptide protein n=1 Tax=Ralstonia solanacearum FQY_4 RepID=M4UL54_RALSL
Uncharacterized protein {ECO:0000313|EMBL:KAK48719.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
putative signal peptide protein
A3-16-all-fractions_k255_2490375_7

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comp(4972..5556)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A56582
secreted protein
Uncharacterized protein {ECO:0000313|EMBL:EKD36207.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
A3-16-all-fractions_k255_2490375_8
Burkholderia sp. KJ006, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5681..6139
DNA (459bp) protein (153aa)
Transcriptional regulator, MarR family n=2 Tax=Burkholderia RepID=A4JP48_BURVG
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AFJ88471.1}; TaxID=416344 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. KJ006.;"
A3-16-all-fractions_k255_2490375_9
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6136..6459
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI0003462821
Uncharacterized protein {ECO:0000313|EMBL:EJK78396.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
hypothetical protein
A3-16-all-fractions_k255_2490375_10
Collimonas fungivorans, Collimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6509..7765
DNA (1257bp) protein (419aa)
Major facilitator superfamily (MFS) multidrug efflux pump n=1 Tax=Collimonas fungivorans (strain Ter331) RepID=G0ACU3_COLFT
pimH; major facilitator superfamily (MFS) multidrug efflux pump
Major facilitator superfamily (MFS) multidrug efflux pump {ECO:0000313|EMBL:AEK62967.1}; TaxID=1005048 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Collimonas.;" source="Collimonas fungivorans (strain Ter331).;"
A3-16-all-fractions_k255_2490375_11
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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8015..9316
DNA (1302bp) protein (434aa)
Twitching motility protein PilT (Fragment) n=1 Tax=sediment metagenome RepID=D9PFY6_9ZZZZ
twitching motility protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
A3-16-all-fractions_k255_2490375_12
unknown

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comp(9338..9733)
DNA (396bp) protein (132aa)

This feature has no annotations

A3-16-all-fractions_k255_2490375_13
unknown

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9841..10017
DNA (177bp) protein (59aa)

This feature has no annotations

A3-16-all-fractions_k255_2490375_14
Methylibium sp. T29-B, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10104..10556
DNA (453bp) protein (151aa)
Heat shock protein, HSP20 family n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHG1_METPP
Spore protein SP21 {ECO:0000313|EMBL:EWS58031.1}; TaxID=1437443 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium sp. T29-B.;"
HSP20 family protein
A3-16-all-fractions_k255_2490375_15
Methylibium petroleiphilum, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10588..11007
DNA (420bp) protein (140aa)
Putative heat shock protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SHG2_METPP
heat shock protein
Putative heat shock protein {ECO:0000313|EMBL:ABM95001.1}; TaxID=420662 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Methylibium.;" source="Methylibium petroleiphilum (strain PM1).;"
A3-16-all-fractions_k255_2490375_16
unknown

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11067..11381
DNA (315bp) protein (105aa)

This feature has no annotations

A3-16-all-fractions_k255_2490375_17
Rubrivivax gelatinosus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11324..11749)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Rubrivivax gelatinosus (strain NBRC 100245 / IL144) RepID=I0HPX1_RUBGI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL95058.1}; TaxID=983917 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax gelatinosus (strain NBRC 100245 / IL144).;"
A3-16-all-fractions_k255_2490375_18
Rubrivivax benzoatilyticus, Rubrivivax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11785..12099)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Rubrivivax benzoatilyticus JA2 = ATCC BAA-35 RepID=F3LVA7_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EGJ12275.1}; TaxID=987059 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Rubrivivax.;" source="Rubrivivax benzoatilyticus JA2 = ATCC BAA-35.;"
flgM; negative regulator of flagellin synthesis FlgM
Displaying 18 items

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